9QFR
Crystal structure of Def1 in complex with actinonin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Peptide deformylase 1 | polymer | 181 | 20433.3 | 2 | UniProt (Q9KVU3) Pfam (PF01327) | Vibrio cholerae O1 biovar El Tor str. N16961 | PDF 1,Polypeptide deformylase 1 |
| 2 | C, E (A, B) | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
| 3 | D, F (A, B) | ACTINONIN | non-polymer | 385.5 | 2 | Chemie (BB2) | |||
| 4 | G, H (A, B) | water | water | 18.0 | 430 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 169 (UniProt: Q9KVU3)
| PDB | External Database | Details |
|---|---|---|
| Met -11 | - | initiating methionine |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| Gly -4 | - | expression tag |
| Ser -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 40866.6 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 888.4 | |
| All* | Total formula weight | 41755.0 |






