9QF6
Structure of P. furiosus 70S ribosome in RsmB deleted strain
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A1) | 16S rRNA | polymer | 1497 | 488596.8 | 1 | Pyrococcus furiosus | ||
| 2 | B (Aa) | Small ribosomal subunit protein uS2 | polymer | 202 | 23039.9 | 1 | UniProt (Q8U0F0) Pfam (PF00318) | Pyrococcus furiosus | 30S ribosomal protein S2 |
| 3 | C (Ab) | Small ribosomal subunit protein uS3 | polymer | 210 | 23464.4 | 1 | UniProt (Q8U004) Pfam (PF07650) Pfam (PF00189) | Pyrococcus furiosus | 30S ribosomal protein S3 |
| 4 | D (Ac) | Small ribosomal subunit protein eS1 | polymer | 198 | 22984.1 | 1 | UniProt (Q8TZE1) Pfam (PF01015) | Pyrococcus furiosus | 30S ribosomal protein S3Ae,Ribosomal protein S1e |
| 5 | E (Ad) | Small ribosomal subunit protein uS4 | polymer | 180 | 21381.9 | 1 | UniProt (P61993) Pfam (PF00163) Pfam (PF01479) | Pyrococcus furiosus | 30S ribosomal protein S4 |
| 6 | F (Ae) | Small ribosomal subunit protein eS4 | polymer | 243 | 28197.0 | 1 | UniProt (Q8U011) Pfam (PF00900) Pfam (PF08071) Pfam (PF01479) | Pyrococcus furiosus | 30S ribosomal protein S4e |
| 7 | G (Af) | Small ribosomal subunit protein uS5 | polymer | 236 | 26590.9 | 1 | UniProt (Q8U017) Pfam (PF00333) Pfam (PF03719) | Pyrococcus furiosus | 30S ribosomal protein S5,PfS5 |
| 8 | H (Ag) | Small ribosomal subunit protein eS6 | polymer | 125 | 14002.3 | 1 | UniProt (Q8U3H8) Pfam (PF01092) | Pyrococcus furiosus | 30S ribosomal protein S6e |
| 9 | I (Ah) | Small ribosomal subunit protein uS7 | polymer | 215 | 24701.8 | 1 | UniProt (Q8U0M8) Pfam (PF00177) | Pyrococcus furiosus | 30S ribosomal protein S7 |
| 10 | J (Ai) | Small ribosomal subunit protein uS8 | polymer | 130 | 14684.2 | 1 | UniProt (Q8U014) Pfam (PF00410) | Pyrococcus furiosus | 30S ribosomal protein S8 |
| 11 | K (Aj) | Small ribosomal subunit protein eS8 | polymer | 127 | 14293.7 | 1 | UniProt (Q8U1Y5) Pfam (PF01201) | Pyrococcus furiosus | 30S ribosomal protein S8e |
| 12 | L (Ak) | Small ribosomal subunit protein uS9 | polymer | 135 | 15317.9 | 1 | UniProt (Q8U0E7) Pfam (PF00380) | Pyrococcus furiosus | 30S ribosomal protein S9 |
| 13 | M (Al) | Small ribosomal subunit protein uS10 | polymer | 102 | 11769.7 | 1 | UniProt (P61885) Pfam (PF00338) | Pyrococcus furiosus | 30S ribosomal protein S10 |
| 14 | N (Am) | Small ribosomal subunit protein uS11 | polymer | 137 | 14757.0 | 1 | UniProt (Q8U0E3) Pfam (PF00411) | Pyrococcus furiosus | 30S ribosomal protein S11 |
| 15 | O (An) | Small ribosomal subunit protein uS12 | polymer | 147 | 16477.6 | 1 | UniProt (P61995) Pfam (PF00164) | Pyrococcus furiosus | 30S ribosomal protein S12 |
| 16 | P (Ao) | Small ribosomal subunit protein uS13 | polymer | 148 | 16948.9 | 1 | UniProt (Q8U0E2) Pfam (PF00416) | Pyrococcus furiosus | 30S ribosomal protein S13 |
| 17 | Q (Ap) | Small ribosomal subunit protein uS14 | polymer | 56 | 6634.0 | 1 | UniProt (Q8U013) Pfam (PF00253) | Pyrococcus furiosus | 30S ribosomal protein S14 type Z |
| 18 | R (Aq) | Small ribosomal subunit protein uS15 | polymer | 158 | 18640.0 | 1 | UniProt (Q8TZD9) Pfam (PF08069) Pfam (PF00312) | Pyrococcus furiosus | 30S ribosomal protein S15 |
| 19 | S (Ar) | Small ribosomal subunit protein uS17 | polymer | 113 | 13296.5 | 1 | UniProt (Q8U008) Pfam (PF00366) | Pyrococcus furiosus | 30S ribosomal protein S17 |
| 20 | T (As) | Small ribosomal subunit protein eS17 | polymer | 67 | 7942.5 | 1 | UniProt (Q8U0U1) Pfam (PF00833) | Pyrococcus furiosus | 30S ribosomal protein S17e |
| 21 | U (At) | Small ribosomal subunit protein uS19 | polymer | 132 | 15357.4 | 1 | UniProt (Q8U002) Pfam (PF00203) | Pyrococcus furiosus | 30S ribosomal protein S19 |
| 22 | V (Au) | Small ribosomal subunit protein eS19 | polymer | 150 | 17394.2 | 1 | UniProt (Q8U0T4) Pfam (PF01090) | Pyrococcus furiosus | |
| 23 | NB, W (Av, Bl) | Small ribosomal subunit protein eS24 | polymer | 99 | 11698.6 | 2 | UniProt (Q8U442) Pfam (PF01282) | Pyrococcus furiosus | 30S ribosomal protein S24e |
| 24 | X (Aw) | Small ribosomal subunit protein eS27 | polymer | 63 | 6888.4 | 1 | UniProt (Q8U474) Pfam (PF01667) | Pyrococcus furiosus | 30S ribosomal protein S27e |
| 25 | Y (Ax) | Small ribosomal subunit protein eS28 | polymer | 71 | 8116.3 | 1 | UniProt (Q8U159) Pfam (PF01200) | Pyrococcus furiosus | 30S ribosomal protein S28e |
| 26 | Z (Az) | Zn-ribbon RNA-binding protein | polymer | 60 | 6824.0 | 1 | UniProt (I6U991) Pfam (PF07754) | Pyrococcus furiosus | |
| 27 | AA (B1) | 23S rRNA | polymer | 3051 | 996450.3 | 1 | Pyrococcus furiosus | ||
| 28 | BA (B2) | 5S rRNA | polymer | 125 | 40589.3 | 1 | Pyrococcus furiosus | ||
| 29 | CA (BA) | Large ribosomal subunit protein uL2 | polymer | 239 | 26085.4 | 1 | UniProt (Q8U001) Pfam (PF00181) Pfam (PF03947) | Pyrococcus furiosus | 50S ribosomal protein L2 |
| 30 | DA (BB) | Large ribosomal subunit protein uL3 | polymer | 365 | 41466.0 | 1 | UniProt (Q8TZZ8) Pfam (PF00297) | Pyrococcus furiosus | 50S ribosomal protein L3 |
| 31 | EA (BC) | Large ribosomal subunit protein uL4 | polymer | 255 | 28765.8 | 1 | UniProt (Q8TZZ9) Pfam (PF00573) | Pyrococcus furiosus | 50S ribosomal protein L4 |
| 32 | FA (BD) | Large ribosomal subunit protein uL5 | polymer | 186 | 21269.9 | 1 | UniProt (Q8U012) Pfam (PF00281) Pfam (PF00673) | Pyrococcus furiosus | 50S ribosomal protein L5 |
| 33 | GA (BE) | Large ribosomal subunit protein uL6 | polymer | 184 | 20891.2 | 1 | UniProt (Q8U015) Pfam (PF00347) | Pyrococcus furiosus | 50S ribosomal protein L6 |
| 34 | HA, IA (BF, BG) | Large ribosomal subunit protein eL8 | polymer | 123 | 13414.7 | 2 | UniProt (Q8U160) Pfam (PF01248) | Pyrococcus furiosus | 50S ribosomal protein L7Ae,Ribosomal protein L8e |
| 35 | JA (BH) | Large ribosomal subunit protein uL16 | polymer | 181 | 20974.4 | 1 | UniProt (Q9UWP5) Pfam (PF00252) | Pyrococcus furiosus | 50S ribosomal protein L10e |
| 36 | KA (BI) | Large ribosomal subunit protein uL13 | polymer | 142 | 16345.4 | 1 | UniProt (Q8U0E6) Pfam (PF00572) | Pyrococcus furiosus | 50S ribosomal protein L13 |
| 37 | LA (BJ) | Large ribosomal subunit protein uL14 | polymer | 141 | 15264.9 | 1 | UniProt (Q8U009) Pfam (PF00238) | Pyrococcus furiosus | 50S ribosomal protein L14 |
| 38 | MA, NA (BK, BL) | Large ribosomal subunit protein eL14 | polymer | 83 | 8979.7 | 2 | UniProt (Q8U2L5) Pfam (PF00467) | Pyrococcus furiosus | 50S ribosomal protein L14e |
| 39 | OA (BM) | Large ribosomal subunit protein uL15 | polymer | 147 | 16439.3 | 1 | UniProt (Q8U018) Pfam (PF00828) | Pyrococcus furiosus | 50S ribosomal protein L15 |
| 40 | PA (BN) | Large ribosomal subunit protein eL15 | polymer | 194 | 22644.9 | 1 | UniProt (Q8U2F9) Pfam (PF00827) | Pyrococcus furiosus | 50S ribosomal protein L15e |
| 41 | QA (BO) | Large ribosomal subunit protein uL18 | polymer | 203 | 23233.9 | 1 | UniProt (Q9HH80) Pfam (PF17144) | Pyrococcus furiosus | 50S ribosomal protein L18,PfL18 |
| 42 | RA (BP) | Large ribosomal subunit protein eL18 | polymer | 120 | 13758.0 | 1 | UniProt (Q8U0E5) Pfam (PF17135) | Pyrococcus furiosus | 50S ribosomal protein L18e |
| 43 | SA (BQ) | Large ribosomal subunit protein eL19 | polymer | 150 | 17920.6 | 1 | UniProt (Q8U016) Pfam (PF01280) | Pyrococcus furiosus | 50S ribosomal protein L19e,PfeL19 |
| 44 | TA (BR) | Large ribosomal subunit protein eL21 | polymer | 97 | 11371.4 | 1 | UniProt (Q8U217) Pfam (PF01157) | Pyrococcus furiosus | 50S ribosomal protein L21e |
| 45 | UA (BS) | Large ribosomal subunit protein uL22 | polymer | 155 | 17679.8 | 1 | UniProt (Q8U003) Pfam (PF00237) | Pyrococcus furiosus | 50S ribosomal protein L22 |
| 46 | VA (BT) | Large ribosomal subunit protein uL23 | polymer | 86 | 9893.7 | 1 | UniProt (Q8U000) Pfam (PF00276) | Pyrococcus furiosus | 50S ribosomal protein L23 |
| 47 | WA (BU) | Large ribosomal subunit protein uL24 | polymer | 121 | 14365.0 | 1 | UniProt (Q8U010) Pfam (PF16906) Pfam (PF00467) | Pyrococcus furiosus | 50S ribosomal protein L24 |
| 48 | XA (BV) | Large ribosomal subunit protein eL24 | polymer | 66 | 7938.3 | 1 | UniProt (Q8U158) Pfam (PF01246) | Pyrococcus furiosus | 50S ribosomal protein L24e |
| 49 | YA (BW) | Large ribosomal subunit protein uL29 | polymer | 72 | 8549.3 | 1 | UniProt (Q8U005) Pfam (PF00831) | Pyrococcus furiosus | 50S ribosomal protein L29 |
| 50 | ZA (BX) | Large ribosomal subunit protein uL30 | polymer | 155 | 17745.0 | 1 | UniProt (Q9HH78) Pfam (PF00327) | Pyrococcus furiosus | 50S ribosomal protein L30,PfL30 |
| 51 | AB (BY) | Large ribosomal subunit protein eL30 | polymer | 99 | 10727.6 | 1 | UniProt (Q8U0M6) Pfam (PF01248) | Pyrococcus furiosus | 50S ribosomal protein L30e |
| 52 | BB (BZ) | Large ribosomal subunit protein eL31 | polymer | 95 | 11083.2 | 1 | UniProt (Q8U3S7) Pfam (PF01198) | Pyrococcus furiosus | 50S ribosomal protein L31e |
| 53 | CB (Ba) | Large ribosomal subunit protein eL32 | polymer | 130 | 15576.6 | 1 | UniProt (Q9HH82) Pfam (PF01655) | Pyrococcus furiosus | 50S ribosomal protein L32e,PfeL32 |
| 54 | DB (Bb) | Large ribosomal subunit protein eL34 | polymer | 89 | 10677.1 | 1 | UniProt (Q8U2L3) Pfam (PF01199) | Pyrococcus furiosus | 50S ribosomal protein L34e |
| 55 | EB (Bc) | Large ribosomal subunit protein eL33 | polymer | 87 | 9755.6 | 1 | UniProt (Q8TZV6) Pfam (PF01247) | Pyrococcus furiosus | 50S ribosomal protein L35Ae |
| 56 | FB (Bd) | Large ribosomal subunit protein eL37 | polymer | 62 | 7245.6 | 1 | UniProt (Q8U0P5) Pfam (PF01907) | Pyrococcus furiosus | 50S ribosomal protein L37e |
| 57 | GB (Be) | Large ribosomal subunit protein eL43 | polymer | 83 | 8956.7 | 1 | UniProt (Q8TZI4) Pfam (PF01780) | Pyrococcus furiosus | 50S ribosomal protein L37Ae,Ribosomal protein L43e |
| 58 | HB (Bf) | Large ribosomal subunit protein eL39 | polymer | 51 | 6323.8 | 1 | UniProt (Q8U3S6) Pfam (PF00832) | Pyrococcus furiosus | 50S ribosomal protein L39e |
| 59 | IB (Bg) | Large ribosomal subunit protein eL40 | polymer | 51 | 5858.1 | 1 | UniProt (Q8U0V6) | Pyrococcus furiosus | 50S ribosomal protein L40e |
| 60 | JB (Bh) | Small ribosomal subunit protein eS32 | polymer | 37 | 5023.4 | 1 | UniProt (Q8U232) | Pyrococcus furiosus | 50S ribosomal protein L41e,Large ribosomal subunit protein eL41 |
| 61 | KB (Bi) | Large ribosomal subunit protein eL42 | polymer | 94 | 11234.4 | 1 | UniProt (Q8U475) Pfam (PF00935) | Pyrococcus furiosus | 50S ribosomal protein L44e |
| 62 | LB (Bj) | Large ribosomal subunit protein eL20 | polymer | 77 | 9350.0 | 1 | UniProt (Q8U3S9) Pfam (PF01775) | Pyrococcus furiosus | 50S ribosomal protein L18Ae,50S ribosomal protein L20e,50S ribosomal protein LX |
| 63 | MB (Bk) | C2H2-type domain-containing protein | polymer | 64 | 7597.2 | 1 | UniProt (Q8U2K5) Pfam (PF00096) | Pyrococcus furiosus | |
| 64 | AC, OB, PB, QB, RB... (Bk, Af, Ap, Ar, Aw...) | ZINC ION | non-polymer | 65.4 | 13 | Chemie (ZN) | |||
| 65 | AD, BC, BD, CC, CD... (BO, A1, BP, Ae, BQ...) | water | water | 18.0 | 1501 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 66 |
| Total formula weight | 2475538.1 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 850.3 | |
| All* | Total formula weight | 2476388.4 |
