Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9QCR

DNA-PK bound to 153 bp H2AX nucleosome model 2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(K)
X-ray repair cross-complementing protein 6polymer60969945.01UniProt (P12956)Homo sapiens (human)5'-deoxyribose-5-phosphate lyase Ku70,5'-dRP lyase Ku70,70 kDa subunit of Ku antigen,ATP-dependent DNA helicase 2 subunit 1,ATP-dependent DNA helicase II 70 kDa subunit,CTC box-binding factor 75 kDa subunit,CTCBF,DNA repair protein XRCC6,Lupus Ku autoantigen protein p70,Ku70,Thyroid-lupus autoantigen,TLAA,X-ray repair complementing defective repair in Chinese hamster cells 6
2B
(L)
X-ray repair cross-complementing protein 5polymer73282812.41UniProt (P13010)Homo sapiens (human)86 kDa subunit of Ku antigen,ATP-dependent DNA helicase 2 subunit 2,ATP-dependent DNA helicase II 80 kDa subunit,CTC box-binding factor 85 kDa subunit,CTCBF,DNA repair protein XRCC5,Ku80,Ku86,Lupus Ku autoantigen protein p86,Nuclear factor IV,Thyroid-lupus autoantigen,TLAA,X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
3C
(O)
DNA-dependent protein kinase catalytic subunitpolymer4128469673.21UniProt (P78527)Homo sapiens (human)DNA-PK catalytic subunit,DNA-PKcs,DNPK1,p460
4D, H
(C, G)
Histone H2AXpolymer14315172.62UniProt (P16104)Homo sapiens (human)H2a/x,Histone H2A.X
5E, I
(D, H)
Histone H2B type 1-Jpolymer12613935.22UniProt (P06899)Homo sapiens (human)Histone H2B.1,Histone H2B.r,H2B/r
6F, J
(A, E)
Histone H3.1polymer13615437.22UniProt (P68431)Homo sapiens (human)Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l
7G, K
(B, F)
Histone H4polymer10311394.42UniProt (P62805)Homo sapiens (human)
8L
(I)
153 bp DNApolymer15346998.91Homo sapiens
9M
(J)
153 bp DNApolymer15347457.21Homo sapiens
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains13
Total formula weight828765.7
All*Total formula weight828765.7
*Water molecules are not included.

247536

PDB entries from 2026-01-14

PDB statisticsPDBj update infoContact PDBjnumon