9Q9N
HSV-1 prefusion glycoprotein B bound by Nb1_gbHSV
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Glycoprotein B | polymer | 954 | 105128.5 | 3 | UniProt (A1Z0P7) Pfam (PF17416) Pfam (PF17417) Pfam (PF00606) UniProt (by SIFTS) (P10211) | Human alphaherpesvirus 1 strain 17 | |
| 2 | D, E, F (d, e, f) | Nb1_gbHSV | polymer | 119 | 12821.3 | 3 | Vicugna pacos | ||
| 3 | G, H, I, J, K... (D, E, F, G, H...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 12 | In PDB GlyTouCan (G42666HT) |
Sequence modifications
A, B, C: 1 - 904 (UniProt: A1Z0P7)
| PDB | External Database | Details |
|---|---|---|
| Cys 392 | Ser 392 | engineered mutation |
| Pro 516 | His 516 | engineered mutation |
| Cys 532 | Gln 532 | engineered mutation |
| Val 709 | Asn 709 | engineered mutation |
| Ala 889 | Tyr 889 | engineered mutation |
| Gln 905 | - | expression tag |
| Leu 906 | - | expression tag |
| Gly 907 | - | expression tag |
| Ser 908 | - | expression tag |
| Gly 909 | - | expression tag |
| Ser 910 | - | expression tag |
| Gly 911 | - | expression tag |
| Thr 912 | - | expression tag |
| Leu 913 | - | expression tag |
| Glu 914 | - | expression tag |
| Val 915 | - | expression tag |
| Leu 916 | - | expression tag |
| Phe 917 | - | expression tag |
| Gln 918 | - | expression tag |
| Gly 919 | - | expression tag |
| Pro 920 | - | expression tag |
| Gly 921 | - | expression tag |
| Gly 922 | - | expression tag |
| Ser 923 | - | expression tag |
| Gly 924 | - | expression tag |
| Ser 925 | - | expression tag |
| Ala 926 | - | expression tag |
| Trp 927 | - | expression tag |
| Ser 928 | - | expression tag |
| His 929 | - | expression tag |
| Pro 930 | - | expression tag |
| Gln 931 | - | expression tag |
| Phe 932 | - | expression tag |
| Glu 933 | - | expression tag |
| Lys 934 | - | expression tag |
| Gly 935 | - | expression tag |
| Gly 936 | - | expression tag |
| Gly 937 | - | expression tag |
| Ser 938 | - | expression tag |
| Gly 939 | - | expression tag |
| Gly 940 | - | expression tag |
| Gly 941 | - | expression tag |
| Ser 942 | - | expression tag |
| Gly 943 | - | expression tag |
| Gly 944 | - | expression tag |
| Ser 945 | - | expression tag |
| Ala 946 | - | expression tag |
| Trp 947 | - | expression tag |
| Ser 948 | - | expression tag |
| His 949 | - | expression tag |
| Pro 950 | - | expression tag |
| Gln 951 | - | expression tag |
| Phe 952 | - | expression tag |
| Glu 953 | - | expression tag |
| Lys 954 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 353849.4 | |
| Branched | Number of molecules | 12 |
| Total formula weight | 5092.8 | |
| All* | Total formula weight | 358942.2 |
