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9Q9H

Cryo-EM structure of human Mre11-Rad50 complex bound to DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA repair protein RAD50polymer1312154150.02UniProt (Q92878)
Pfam (PF13476)
Pfam (PF04423)
Pfam (PF13558)
Homo sapiens (human)
2C, D
(D, E)
Double-strand break repair protein MRE11polymer73884032.72UniProt (P49959)
Pfam (PF00149)
Pfam (PF04152)
Homo sapiens (human)Meiotic recombination 11 homolog 1,MRE11 homolog 1,Meiotic recombination 11 homolog A,MRE11 homolog A
3E
(P)
DNA (50-MER)polymer5015164.71Homo sapiens
4F
(T)
DNA (50-MER)polymer5015615.41Homo sapiens
5G, I
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6H, J
(A, B)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.22Chemie (ADP)
7K, L
(B)
BERYLLIUM TRIFLUORIDE IONnon-polymer66.02Chemie (BEF)
8M, N, O, P
(D, E)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
9Q, R, S
(A, B, E)
waterwater18.05Chemie (HOH)
Sequence modifications
D, E: 1 - 708 (UniProt: P49959)
PDBExternal DatabaseDetails
Ser 709-expression tag
Gly 710-expression tag
Gly 711-expression tag
Ser 712-expression tag
Leu 713-expression tag
Glu 714-expression tag
Val 715-expression tag
Leu 716-expression tag
Phe 717-expression tag
Gln 718-expression tag
Gly 719-expression tag
Pro 720-expression tag
Asp 721-expression tag
Tyr 722-expression tag
Lys 723-expression tag
Asp 724-expression tag
Asp 725-expression tag
Asp 726-expression tag
Asp 727-expression tag
Lys 728-expression tag
Gly 729-expression tag
Thr 730-expression tag
Asp 731-expression tag
Tyr 732-expression tag
Lys 733-expression tag
Asp 734-expression tag
Asp 735-expression tag
Asp 736-expression tag
Asp 737-expression tag
Lys 738-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight507145.5
Non-Polymers*Number of molecules10
Total formula weight1254.8
All*Total formula weight508400.2
*Water molecules are not included.

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PDB entries from 2025-10-08

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