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9Q9F

DNA-PK bound to a 153 bp H2AX nucleosome model 1

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(K)
X-ray repair cross-complementing protein 6polymer60969945.01UniProt (P12956)Homo sapiens (human)5'-deoxyribose-5-phosphate lyase Ku70,5'-dRP lyase Ku70,70 kDa subunit of Ku antigen,ATP-dependent DNA helicase 2 subunit 1,ATP-dependent DNA helicase II 70 kDa subunit,CTC box-binding factor 75 kDa subunit,CTCBF,DNA repair protein XRCC6,Lupus Ku autoantigen protein p70,Ku70,Thyroid-lupus autoantigen,TLAA,X-ray repair complementing defective repair in Chinese hamster cells 6
2B
(L)
X-ray repair cross-complementing protein 5polymer73282812.41UniProt (P13010)Homo sapiens (human)86 kDa subunit of Ku antigen,ATP-dependent DNA helicase 2 subunit 2,ATP-dependent DNA helicase II 80 kDa subunit,CTC box-binding factor 85 kDa subunit,CTCBF,DNA repair protein XRCC5,Ku80,Ku86,Lupus Ku autoantigen protein p86,Nuclear factor IV,Thyroid-lupus autoantigen,TLAA,X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
3C
(I)
DNApolymer15346998.91Homo sapiens (human)
4D
(J)
DNApolymer15347457.21Homo sapiens (human)
5E
(O)
DNA-dependent protein kinase catalytic subunitpolymer4128469673.21UniProt (P78527)Homo sapiens (human)DNA-PK catalytic subunit,DNA-PKcs,DNPK1,p460
6F, J
(C, G)
Histone H2AXpolymer14315172.62UniProt (P16104)Homo sapiens (human)H2a/x,Histone H2A.X
7G, K
(D, H)
Histone H2B type 1-Jpolymer12613935.22UniProt (P06899)Homo sapiens (human)Histone H2B.1,Histone H2B.r,H2B/r
8H, L
(A, E)
Histone H3.1polymer13615437.22UniProt (P68431)Homo sapiens (human)Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l
9I, M
(B, F)
Histone H4polymer10311394.42UniProt (P62805)Homo sapiens (human)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains13
Total formula weight828765.7
All*Total formula weight828765.7
*Water molecules are not included.

247536

PDB entries from 2026-01-14

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