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9Q8H

SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline derivative BDH 34019023

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
2'-O-methyltransferase nsp16polymer30434150.11UniProt (P0DTD1)
Pfam (PF06460)
Severe acute respiratory syndrome coronavirus 2Non-structural protein 16,nsp16
2B
(B)
Non-structural protein 10polymer14014860.01UniProt (P0DTD1)
Pfam (PF09401)
Severe acute respiratory syndrome coronavirus 2nsp10,Growth factor-like peptide,GFL
3C
(A)
S-ADENOSYLMETHIONINEnon-polymer398.41Chemie (SAM)
4BA, D, E, G, H...
(B, A)
1,2-ETHANEDIOLnon-polymer62.117Chemie (EDO)
5F
(A)
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.21Chemie (MES)
6L, R
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
7S
(A)
9-[(3~{R},4~{R})-1-(3-azanylpropanoyl)-4-oxidanyl-pyrrolidin-3-yl]-1,3-dimethyl-purine-2,6-dionenon-polymer336.31Chemie (A1I4H)
8T
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
9V, W
(B)
ZINC IONnon-polymer65.42Chemie (ZN)
10AA
(B)
IMIDAZOLEnon-polymer69.11Chemie (IMD)
11CA, DA
(A, B)
waterwater18.0322Chemie (HOH)
Sequence modifications
A: 6799 - 7096 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Glu 7097-expression tag
Asn 7098-expression tag
Leu 7099-expression tag
Tyr 7100-expression tag
Phe 7101-expression tag
Gln 7102-expression tag
B: 4254 - 4392 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Gly 4253-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight49010.1
Non-Polymers*Number of molecules26
Total formula weight2266.5
All*Total formula weight51276.6
*Water molecules are not included.

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PDB entries from 2025-06-11

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