9Q5M
Structure of the Measles virus Fusion glycoprotein ectodomain in complex with neutralizing antibody Y10F
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Fusion glycoprotein F0 | polymer | 532 | 57379.5 | 6 | UniProt (Q786F3) Pfam (PF00523) | Measles morbillivirus | |
| 2 | G (G) | Y10F light chain | polymer | 232 | 25209.2 | 1 | Mus musculus | ||
| 3 | H (I) | Y10F heavy chain | polymer | 478 | 52295.9 | 1 | Mus musculus | ||
| 4 | I (H) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 5 | J, L, N, O (J, L, N, O) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 6 | K, M (K, M) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 2 | In PDB GlyTouCan (G22768VO) | |||
| 7 | P (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) PubChem (24139) | |||
| 8 | Q, R, S, T, U... (A, B, C, D, E...) | water | water | 18.0 | 63 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 495 (UniProt: Q786F3)
| PDB | External Database | Details |
|---|---|---|
| Gly 170 | Glu 170 | conflict |
| Gly 455 | Glu 455 | conflict |
| Gly 496 | - | expression tag |
| Val 497 | - | expression tag |
| Asp 498 | - | expression tag |
| Asp 499 | - | expression tag |
| Asp 500 | - | expression tag |
| Asp 501 | - | expression tag |
| Lys 502 | - | expression tag |
| Ala 503 | - | expression tag |
| Gly 504 | - | expression tag |
| Trp 505 | - | expression tag |
| Ser 506 | - | expression tag |
| His 507 | - | expression tag |
| Pro 508 | - | expression tag |
| Gln 509 | - | expression tag |
| Phe 510 | - | expression tag |
| Glu 511 | - | expression tag |
| Lys 512 | - | expression tag |
| Gly 513 | - | expression tag |
| Gly 514 | - | expression tag |
| Gly 515 | - | expression tag |
| Ser 516 | - | expression tag |
| Gly 517 | - | expression tag |
| Gly 518 | - | expression tag |
| Gly 519 | - | expression tag |
| Ser 520 | - | expression tag |
| Gly 521 | - | expression tag |
| Gly 522 | - | expression tag |
| Gly 523 | - | expression tag |
| Ser 524 | - | expression tag |
| Trp 525 | - | expression tag |
| Ser 526 | - | expression tag |
| His 527 | - | expression tag |
| Pro 528 | - | expression tag |
| Gln 529 | - | expression tag |
| Phe 530 | - | expression tag |
| Glu 531 | - | expression tag |
| Lys 532 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 421782.3 | |
| Branched | Number of molecules | 7 |
| Total formula weight | 4105.8 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 426109.3 |
