9PW0
Crystal structure of Taylorella equigenitalis BaDTF3 deaminase toxin DddB bound to double-stranded DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (A, B) | YD repeat protein | polymer | 130 | 14720.8 | 2 | UniProt (A0A654KG07) | Taylorella equigenitalis | |
| 2 | B, E (E, C) | DNA substrate | polymer | 14 | 4280.8 | 2 | Taylorella equigenitalis | ||
| 3 | C, F (F, D) | DNA substrate | polymer | 14 | 4280.8 | 2 | Taylorella equigenitalis | ||
| 4 | G, H (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) PubChem (32051) | |||
| 5 | I (B) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) PubChem (312) | |||
| 6 | J, K, L, M, N (A, E, F, B, C) | water | water | 18.0 | 5 | Chemie (HOH) |
Sequence modifications
A, B: 1938 - 2060 (UniProt: A0A654KG07)
| PDB | External Database | Details |
|---|---|---|
| Met 1937 | - | initiating methionine |
| Ala 1995 | Glu 1995 | conflict |
| His 2061 | - | expression tag |
| His 2062 | - | expression tag |
| His 2063 | - | expression tag |
| His 2064 | - | expression tag |
| His 2065 | - | expression tag |
| His 2066 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 46564.8 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 166.3 | |
| All* | Total formula weight | 46731.1 |
