9PLA
The structure of O-glycopeptidase BcM60C (E665A mutant) from Bacteroides caccae in complex with a core 2 glycan
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | O-glycopeptidase BcM60C | polymer | 524 | 59833.3 | 1 | UniProt (A0A6H9QAX6) | Bacteroides caccae ATCC 43185 | |
| 2 | B (F) | beta-D-galactopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)]2-acetamido-2-deoxy-alpha-D-galactopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G00033MO) | |||
| 3 | C (A) | THREONINE | non-polymer | 119.1 | 1 | Chemie (THR) PubChem (6288) | |||
| 4 | D (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) PubChem (32051) | |||
| 5 | E, F (A) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 6 | G, H, I, J, K... (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 6 | Chemie (EDO) | |||
| 7 | M (A) | water | water | 18.0 | 230 | Chemie (HOH) |
Sequence modifications
A: 418 - 937 (UniProt: A0A6H9QAX6)
| PDB | External Database | Details |
|---|---|---|
| Gly 414 | - | expression tag |
| Ser 415 | - | expression tag |
| His 416 | - | expression tag |
| Met 417 | - | expression tag |
| Ala 665 | Glu 665 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 59833.3 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 586.5 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 749.1 | |
| All* | Total formula weight | 61168.9 |
