9PL9

Cryo-EM structure of modified JEV virus E protein dimer

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B (A, B)	Genome polyprotein	polymer	428	46053.7	2	UniProt (A0A8E6P5G2)	Japanese encephalitis virus
2	C, D (C, G)	alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		748.7	2	In PDB GlyTouCan (G81315DD)

Sequence modifications

A, B: 0 - 401 (UniProt: A0A8E6P5G2)

PDB	External Database	Details
Gly -17	-	expression tag
Ser -16	-	expression tag
Gly -15	-	expression tag
Glu -14	-	expression tag
Gln -13	-	expression tag
Lys -12	-	expression tag
Leu -11	-	expression tag
Ile -10	-	expression tag
Ser -9	-	expression tag
Glu -8	-	expression tag
Glu -7	-	expression tag
Asp -6	-	expression tag
Leu -5	-	expression tag
Gly -4	-	expression tag
Gly -3	-	expression tag
Gly -2	-	expression tag
Gly -1	-	expression tag
Cys 5	Gly 299	conflict
Cys 102	Gly 396	conflict
Gly 402	-	expression tag
Thr 403	-	expression tag
Gly 404	-	expression tag
His 405	-	expression tag
His 406	-	expression tag
His 407	-	expression tag
His 408	-	expression tag
His 409	-	expression tag
His 410	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	92107.4
Branched	Number of molecules	2
	Total formula weight	1497.4
All*	Total formula weight	93604.8

*Water molecules are not included.