9PIH

E. coli 70S ribosome bound to Doxycycline

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (0)	50S ribosomal protein L33	polymer	55	6388.6	1	UniProt (C3SME7)	Escherichia coli
2	B (1)	50S ribosomal protein L34	polymer	46	5397.5	1	UniProt (B7MGC4)	Escherichia coli
3	C (2)	50S ribosomal protein L35	polymer	65	7313.0	1	UniProt (P0A7Q1)	Escherichia coli	Large ribosomal subunit protein bL35,Ribosomal protein A
4	D (3)	50S ribosomal protein L36	polymer	38	4377.4	1	UniProt (A0A0E2L017)	Escherichia coli
5	E (4)	50S ribosomal protein L31	polymer	70	7887.1	1	UniProt (P0A7M9)	Escherichia coli	Large ribosomal subunit protein bL31-A
6	F (A)	16S ribosomal RNA	polymer	1542	499873.4	1	GenBank (1700704455)	Escherichia coli
7	G (B)	30S ribosomal protein S2	polymer	241	26781.7	1	UniProt (C3TPN2)	Escherichia coli
8	H (C)	Small ribosomal subunit protein uS3	polymer	233	26031.3	1	UniProt (B7MCS9)	Escherichia coli
9	I (D)	Small ribosomal subunit protein uS4	polymer	206	23514.2	1	UniProt (P0A7V8)	Escherichia coli
10	J (E)	Small ribosomal subunit protein uS5	polymer	167	17629.4	1	UniProt (P0A7W1)	Escherichia coli
11	K (F)	Small ribosomal subunit protein bS6	polymer	135	15727.5	1	UniProt (P02358)	Escherichia coli
12	L (G)	Small ribosomal subunit protein uS7	polymer	179	20055.2	1	UniProt (P02359)	Escherichia coli
13	M (H)	Small ribosomal subunit protein uS8	polymer	130	14146.6	1	UniProt (C3SR12)	Escherichia coli
14	N (I)	Small ribosomal subunit protein uS9	polymer	130	14886.3	1	UniProt (C3SRY2)	Escherichia coli
15	O (J)	Small ribosomal subunit protein uS10	polymer	103	11755.6	1	UniProt (C3SQT7)	Escherichia coli
16	P (K)	30S ribosomal protein S11	polymer	129	13871.0	1	UniProt (B7MCR3)	Escherichia coli
17	Q (L)	Small ribosomal subunit protein uS12	polymer	124	13814.2	1	UniProt (A0A0F1AUC4)	Escherichia coli
18	R (M)	Small ribosomal subunit protein uS13	polymer	118	13128.5	1	UniProt (A0A7U9IV78)	Escherichia coli
19	S (N)	Small ribosomal subunit protein uS14	polymer	101	11606.6	1	UniProt (A0A2X1PQW4)	Escherichia coli
20	T (O)	Small ribosomal subunit protein uS15	polymer	89	10290.8	1	UniProt (C3SSQ7)	Escherichia coli
21	U (P)	Small ribosomal subunit protein bS16	polymer	82	9207.6	1	UniProt (C3SYP2)	Escherichia coli
22	V (Q)	Small ribosomal subunit protein uS17	polymer	84	9724.5	1	UniProt (C3SQY7)	Escherichia coli
23	W (R)	Small ribosomal subunit protein bS18	polymer	75	9005.5	1	UniProt (A0A0E2KXL3)	Escherichia coli
24	X (S)	Small ribosomal subunit protein uS19	polymer	92	10455.4	1	UniProt (C3SQW2)	Escherichia coli
25	Y (T)	Small ribosomal subunit protein bS20	polymer	87	9708.5	1	UniProt (C3TRH7)	Escherichia coli
26	Z (U)	Small ribosomal subunit protein bS21	polymer	71	8524.0	1	UniProt (A0A0E2L2J1)	Escherichia coli
27	AA (X)	messenger RNA (mRNA)	polymer	22	7115.3	1		Escherichia coli
28	BA (Z)	P-site tRNA	polymer	76	24541.7	1	GenBank (1845258627)	Escherichia coli
29	CA (a)	23S ribosomal RNA	polymer	2904	941811.6	1		Escherichia coli
30	DA (b)	5S ribosomal RNA	polymer	120	38790.1	1	GenBank (1273279017)	Escherichia coli
31	EA (c)	50S ribosomal protein L2	polymer	273	29923.6	1	UniProt (P60422)	Escherichia coli	Large ribosomal subunit protein uL2
32	FA (d)	50S ribosomal protein L3	polymer	209	22291.6	1	UniProt (C3SQU2)	Escherichia coli
33	GA (e)	Large ribosomal subunit protein uL4	polymer	201	22121.6	1	UniProt (P60723)	Escherichia coli	50S ribosomal protein L4
34	HA (f)	Large ribosomal subunit protein uL5	polymer	179	20333.6	1	UniProt (P62399)	Escherichia coli	50S ribosomal protein L5
35	IA (g)	Large ribosomal subunit protein uL6	polymer	177	18932.8	1	UniProt (P0AG55)	Escherichia coli	50S ribosomal protein L6
36	JA (h)	Large ribosomal subunit protein bL9	polymer	149	15789.0	1	UniProt (P0A7R1)	Escherichia coli	50S ribosomal protein L9
37	KA (i)	Large ribosomal subunit protein uL13	polymer	142	16050.6	1	UniProt (P0AA10)	Escherichia coli	50S ribosomal protein L13
38	LA (j)	Large ribosomal subunit protein uL14	polymer	123	13565.1	1	UniProt (P0ADY3)	Escherichia coli	50S ribosomal protein L14
39	MA (k)	Large ribosomal subunit protein uL15	polymer	144	15008.5	1	UniProt (P02413)	Escherichia coli	50S ribosomal protein L15
40	NA (l)	50S ribosomal protein L16	polymer	136	15327.3	1	UniProt (P0ADY7)	Escherichia coli	Large ribosomal subunit protein uL16
41	OA (m)	Large ribosomal subunit protein bL17	polymer	127	14393.7	1	UniProt (P0AG44)	Escherichia coli	50S ribosomal protein L17
42	PA (n)	Large ribosomal subunit protein uL18	polymer	117	12794.7	1	UniProt (P0C018)	Escherichia coli	50S ribosomal protein L18
43	QA (o)	Large ribosomal subunit protein bL19	polymer	115	13159.3	1	UniProt (P0A7K8)	Escherichia coli
44	RA (p)	50S ribosomal protein L20	polymer	118	13528.0	1	UniProt (B7MAS6)	Escherichia coli
45	SA (q)	Ribosomal protein L21	polymer	103	11586.4	1	UniProt (C3SSG2)	Escherichia coli
46	TA (r)	50S ribosomal protein L22	polymer	110	12253.4	1	UniProt (P61175)	Escherichia coli	Large ribosomal subunit protein uL22
47	UA (s)	50S ribosomal protein L23	polymer	100	11222.2	1	UniProt (C3SQV2)	Escherichia coli
48	VA (t)	50S ribosomal protein L24	polymer	104	11339.3	1	UniProt (C3SQZ7)	Escherichia coli
49	WA (u)	Large ribosomal subunit protein bL25	polymer	94	10713.5	1	UniProt (P68919)	Escherichia coli
50	XA (v)	50S ribosomal protein L27	polymer	85	9146.5	1	UniProt (P0A7L8)	Escherichia coli	Large ribosomal subunit protein bL27
51	YA (w)	50S ribosomal protein L28	polymer	78	9027.6	1	UniProt (A0A1X3JA73)	Escherichia coli
52	ZA (x)	Large ribosomal subunit protein uL29	polymer	63	7286.5	1	UniProt (C3SQY2)	Escherichia coli
53	AB (y)	50S ribosomal protein L30	polymer	59	6554.8	1	UniProt (C3SR32)	Escherichia coli
54	BB (z)	50S ribosomal protein L32	polymer	57	6463.4	1	UniProt (C3TE02)	Escherichia coli
55	CB (3)	ZINC ION	non-polymer		65.4	1	Chemie (ZN)
56	AC, AD, AF, AG, AH... (A, a, b, p)	MAGNESIUM ION	non-polymer		24.3	276	Chemie (MG)
57	AL, BJ, BK, BP, CH... (a, A, b)	POTASSIUM ION	non-polymer		39.1	92	Chemie (K)
58	AE, IN, JM, MP, OM... (A, a, r)	(4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE	non-polymer		444.4	6	Chemie (DXT)
59	AQ, BQ, CQ, DQ, EQ... (j, k, l, m, p...)	water	water		18.0	1335	Chemie (HOH)

Contents of the asymmetric unit

Polymers	Number of chains	54
	Total formula weight	2172172.5
Non-Polymers*	Number of molecules	375
	Total formula weight	13037.2
All*	Total formula weight	2185209.7

*Water molecules are not included.