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9PFQ

The cryo-EM structure of C. crescentus DriD-ssDNA-RNAP-Sigma73-bapE promoter transcription activation complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA-directed RNA polymerase subunit alphapolymer33837315.52UniProt (Q9A8S9)Caulobacter vibrioides NA1000RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha
2C
(C)
DNA-directed RNA polymerase subunit betapolymer1356151085.61UniProt (Q9AAU2)Caulobacter vibrioides NA1000RNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta
3D
(D)
DNA-directed RNA polymerase subunit beta'polymer1396154467.01UniProt (Q9AAU1)Caulobacter vibrioides NA1000RNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta'
4E
(E)
DNA-directed RNA polymerase subunit omegapolymer11913289.81UniProt (P58066)Caulobacter vibrioides NA1000RNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega
5F
(F)
RNA polymerase sigma factor RpoDpolymer65272770.21UniProt (P52324)Caulobacter vibrioides NA1000Sigma-70
6G
(H)
DNA (64-MER)-non templatepolymer9027645.61GenBank (220962111)Caulobacter vibrioides NA1000
7H
(I)
DNA (51-MER)-templatepolymer9027885.71GenBank (220962111)Caulobacter vibrioides NA1000
8I, L
(Q, R)
WYL domain-containing proteinpolymer33136212.22UniProt (Q9A999)Caulobacter vibrioides NA1000
9J, K
(L, Y)
DNA (5'-D(P*GP*TP*C)-3')polymer72103.42Caulobacter vibrioides NA1000
10M
(D)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
11N, O
(D)
ZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight598406.3
Non-Polymers*Number of molecules3
Total formula weight155.1
All*Total formula weight598561.5
*Water molecules are not included.

249697

PDB entries from 2026-02-25

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