9PEL

Structure of EBOV GP, MWAC-3634, and Nanosota-EB2 ternary complex

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C (D, H, J)	Nanosota-EB2	polymer	144	15722.1	3		Vicugna pacos
2	D, F, H (A, B, C)	Envelope glycoprotein GP1	polymer	342	37664.5	3	UniProt (Q05320) Pfam (PF01611)	Ebola virus
3	E, G, I (a, b, c)	Envelope glycoprotein GP2	polymer	167	18888.3	3	UniProt (Q05320) Pfam (PF22307)	Ebola virus
4	J (E)	alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		910.8	1	In PDB GlyTouCan (G22768VO)
5	K (F)	alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		910.8	1	In PDB GlyTouCan (G51945PF)
6	L (G)	alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		1073.0	1	In PDB GlyTouCan (G09724ZC)
7	M, N, O (A, B, C)	(3S,4R)-1-{(2P)-2-(6-chloroquinolin-4-yl)-1-[(1R)-1-(naphthalen-1-yl)ethyl]-1H-1,3-benzimidazole-6-carbonyl}-N-methyl-4-[3-(trifluoromethyl)phenyl]pyrrolidine-3-carboxamide	non-polymer		732.2	3	Chemie (A1CIK)

Sequence modifications

A, B, C: 32 - 312 (UniProt: Q05320)

PDB	External Database	Details
Met 9	-	initiating methionine
Asp 10	-	expression tag
Ala 11	-	expression tag
Met 12	-	expression tag
Lys 13	-	expression tag
Arg 14	-	expression tag
Gly 15	-	expression tag
Leu 16	-	expression tag
Cys 17	-	expression tag
Cys 18	-	expression tag
Val 19	-	expression tag
Leu 20	-	expression tag
Leu 21	-	expression tag
Leu 22	-	expression tag
Cys 23	-	expression tag
Gly 24	-	expression tag
Ala 25	-	expression tag
Val 26	-	expression tag
Phe 27	-	expression tag
Val 28	-	expression tag
Ser 29	-	expression tag
Ala 30	-	expression tag
Ser 31	-	expression tag

A, B, C: 313 - 350 (UniProt: Q05320)
a, b, c: 502 - 632 (UniProt: Q05320)

PDB	External Database	Details
Gly 633	-	expression tag
Ser 634	-	expression tag
Gly 635	-	expression tag
Tyr 636	-	expression tag
Ile 637	-	expression tag
Pro 638	-	expression tag
Glu 639	-	expression tag
Ala 640	-	expression tag
Pro 641	-	expression tag
Arg 642	-	expression tag
Asp 643	-	expression tag
Gly 644	-	expression tag
Gln 645	-	expression tag
Ala 646	-	expression tag
Tyr 647	-	expression tag
Val 648	-	expression tag
Arg 649	-	expression tag
Lys 650	-	expression tag
Asp 651	-	expression tag
Gly 652	-	expression tag
Glu 653	-	expression tag
Trp 654	-	expression tag
Val 655	-	expression tag
Leu 656	-	expression tag
Leu 657	-	expression tag
Ser 658	-	expression tag
Thr 659	-	expression tag
Phe 660	-	expression tag
Leu 661	-	expression tag
Gly 662	-	expression tag
His 663	-	expression tag
His 664	-	expression tag
His 665	-	expression tag
His 666	-	expression tag
His 667	-	expression tag
His 668	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	9
	Total formula weight	216824.8
Branched	Number of molecules	3
	Total formula weight	2894.6
Non-Polymers*	Number of molecules	3
	Total formula weight	2196.6
All*	Total formula weight	221916.0

*Water molecules are not included.