9P6X
Structure of EBOV glycoprotein in complex with Nanosota-EB1 and EB2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Envelope glycoprotein | polymer | 509 | 56534.7 | 3 | UniProt (Q05320) Pfam (PF01611) Pfam (PF22307) | Ebola virus | GP1,2,GP,GP1,2-delta |
| 2 | D, E, F (D, E, F) | Nanosota-EB1 | polymer | 143 | 15592.2 | 3 | Vicugna pacos | ||
| 3 | G, H, I (G, H, I) | Nanosota-EB2 | polymer | 143 | 15591.0 | 3 | Vicugna pacos | ||
| 4 | J, K (J, K) | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 2 | In PDB GlyTouCan (G34442SS) | |||
| 5 | L (L) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
| 6 | M, N, O (A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A, B, C: 32 - 463 (UniProt: Q05320)
A, B, C: 464 - 632 (UniProt: Q05320)
| PDB | External Database | Details |
|---|---|---|
| Met 9 | - | initiating methionine |
| Asp 10 | - | expression tag |
| Ala 11 | - | expression tag |
| Met 12 | - | expression tag |
| Lys 13 | - | expression tag |
| Arg 14 | - | expression tag |
| Gly 15 | - | expression tag |
| Leu 16 | - | expression tag |
| Cys 17 | - | expression tag |
| Cys 18 | - | expression tag |
| Val 19 | - | expression tag |
| Leu 20 | - | expression tag |
| Leu 21 | - | expression tag |
| Leu 22 | - | expression tag |
| Cys 23 | - | expression tag |
| Gly 24 | - | expression tag |
| Ala 25 | - | expression tag |
| Val 26 | - | expression tag |
| Phe 27 | - | expression tag |
| Val 28 | - | expression tag |
| Ser 29 | - | expression tag |
| Ala 30 | - | expression tag |
| Ser 31 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 633 | - | expression tag |
| Ser 634 | - | expression tag |
| Gly 635 | - | expression tag |
| Tyr 636 | - | expression tag |
| Ile 637 | - | expression tag |
| Pro 638 | - | expression tag |
| Glu 639 | - | expression tag |
| Ala 640 | - | expression tag |
| Pro 641 | - | expression tag |
| Arg 642 | - | expression tag |
| Asp 643 | - | expression tag |
| Gly 644 | - | expression tag |
| Gln 645 | - | expression tag |
| Ala 646 | - | expression tag |
| Tyr 647 | - | expression tag |
| Val 648 | - | expression tag |
| Arg 649 | - | expression tag |
| Lys 650 | - | expression tag |
| Asp 651 | - | expression tag |
| Gly 652 | - | expression tag |
| Glu 653 | - | expression tag |
| Trp 654 | - | expression tag |
| Val 655 | - | expression tag |
| Leu 656 | - | expression tag |
| Leu 657 | - | expression tag |
| Ser 658 | - | expression tag |
| Thr 659 | - | expression tag |
| Phe 660 | - | expression tag |
| Leu 661 | - | expression tag |
| Gly 662 | - | expression tag |
| His 663 | - | expression tag |
| His 664 | - | expression tag |
| His 665 | - | expression tag |
| His 666 | - | expression tag |
| His 667 | - | expression tag |
| His 668 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 263153.5 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 3056.8 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 663.6 | |
| All* | Total formula weight | 266873.8 |
