9P6H
Structure of P. gingivalis PorK and PorN complexes from cryo electron microscopy
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Gliding motility protein GldN | polymer | 254 | 30080.9 | 1 | UniProt (Q7MXB4) Pfam (PF19841) | Porphyromonas gingivalis W83 | |
| 2 | B (B) | Lipoprotein, putative | polymer | 447 | 51184.9 | 1 | UniProt (Q7MXB7) Pfam (PF03781) | Porphyromonas gingivalis W83 | |
| 3 | C, D (C, D) | 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-L-fucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose | branched | 1217.1 | 2 | In PDB | |||
| 4 | E (E) | beta-D-glucopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose | branched | 664.6 | 1 | In PDB | |||
| 5 | F, G (A) | beta-D-mannopyranose | non-polymer | 180.2 | 2 | Chemie (BMA) | |||
| 6 | H (B) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 81265.8 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 3098.7 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 400.4 | |
| All* | Total formula weight | 84764.9 |
