9P0D
Crystal structure of Sr2+-bound RTX domain block V of adenylate cyclase toxin from Bordetella pertussis
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Hemolysin | polymer | 179 | 19009.4 | 1 | UniProt (P0DKX7) Pfam (PF00353) Pfam (PF06594) | Bordetella pertussis | |
| 2 | B, C, D, E, F... (A) | STRONTIUM ION | non-polymer | 87.6 | 8 | Chemie (SR) | |||
| 3 | J (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 4 | K (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 5 | L, M (A) | FORMYL GROUP | non-polymer | 30.0 | 2 | Chemie (FOR) | |||
| 6 | N (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 7 | O, P (A) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 2 | Chemie (TRS) | |||
| 8 | Q (A) | water | water | 18.0 | 110 | Chemie (HOH) |
Sequence modifications
A: 1529 - 1680 (UniProt: P0DKX7)
| PDB | External Database | Details |
|---|---|---|
| Met 1510 | - | initiating methionine |
| Arg 1511 | - | expression tag |
| Gly 1512 | - | expression tag |
| Ser 1513 | - | expression tag |
| His 1514 | - | expression tag |
| His 1515 | - | expression tag |
| His 1516 | - | expression tag |
| His 1517 | - | expression tag |
| His 1518 | - | expression tag |
| His 1519 | - | expression tag |
| Gly 1520 | - | cloning artifact |
| Ser 1521 | - | cloning artifact |
| His 1522 | - | cloning artifact |
| Met 1523 | - | cloning artifact |
| Glu 1524 | - | cloning artifact |
| Leu 1525 | - | cloning artifact |
| Gly 1526 | - | cloning artifact |
| Ala 1527 | - | cloning artifact |
| Ser 1528 | - | cloning artifact |
| Glu 1681 | - | cloning artifact |
| Phe 1682 | - | cloning artifact |
| Thr 1683 | - | cloning artifact |
| Ser 1684 | - | cloning artifact |
| Leu 1685 | - | cloning artifact |
| Glu 1686 | - | cloning artifact |
| Lys 1687 | - | cloning artifact |
| Asn 1688 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 19009.4 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1155.8 | |
| All* | Total formula weight | 20165.2 |
