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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9OZ9

Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA.

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(1)		23S rRNApolymer2862927297.21GenBank (1735479352)Flavobacterium johnsoniae
2B
(2)		16S rRNApolymer1520491833.31Flavobacterium johnsoniae
3C
(3)		5S rRNApolymer11135662.01GenBank (146152184)Flavobacterium johnsoniae
4D
(4)		50S ribosomal protein L38polymer505569.71UniProt (A0A1M5JJE6)Flavobacterium johnsoniae
5E
(5)		50S ribosomal protein L38polymer303696.61UniProt (A5FJQ0)Flavobacterium johnsoniae
6F
(6)		mFjoh_4413 mRNApolymer61893.21Flavobacterium johnsoniae
7G
(A)		fMet-tRNApolymer7724786.81GenBank (2512344223)Flavobacterium johnsoniae
8H
(B)		50S ribosomal protein L2polymer27429991.61UniProt (A0A1B2U0Q0)Flavobacterium johnsoniae
9I
(C)		50S ribosomal protein L3polymer20521975.41UniProt (A0A1M5L9Q4)Flavobacterium johnsoniae
10J
(D)		50S ribosomal protein L4polymer20923187.61UniProt (A0A1M7D775)Flavobacterium johnsoniae
11K
(E)		50S ribosomal protein L5polymer18320799.31Flavobacterium johnsoniae
12L
(F)		50S ribosomal protein L6polymer18019420.41UniProt (A0A1M5L807)Flavobacterium johnsoniae
13M
(G)		50S ribosomal protein L9polymer14615968.61UniProt (A5FE75)Flavobacterium johnsoniae
14N
(H)		30S ribosomal protein S2polymer25428107.61UniProt (A5FJG9)Flavobacterium johnsoniae
15O
(J)		50S ribosomal protein L13polymer15116578.31UniProt (A0A1M5GAA6)Flavobacterium johnsoniae
16P
(K)		50S ribosomal protein L14polymer12213339.51UniProt (A5FMZ0)Flavobacterium johnsoniae
17Q
(L)		50S ribosomal protein L15polymer15015994.31UniProt (A0A1M7D8T3)Flavobacterium johnsoniae
18R
(M)		50S ribosomal protein L16polymer14116075.11UniProt (A0A1B2U0I0)Flavobacterium johnsoniae
19S
(N)		50S ribosomal protein L17polymer16318092.91UniProt (A0A1M5L6R0)Flavobacterium johnsoniae
20T
(O)		50S ribosomal protein L18polymer11612660.71UniProt (A0A1M7D8T4)Flavobacterium johnsoniae
21U
(P)		50S ribosomal protein L19polymer11613316.61UniProt (A0A1M5PX52)Flavobacterium johnsoniae
22V
(Q)		50S ribosomal protein L20polymer11413244.71UniProt (A0A1B2U1H3)Flavobacterium johnsoniae
23W
(R)		50S ribosomal protein L21polymer14715901.51UniProt (A0A1M5GFZ4)Flavobacterium johnsoniae
24X
(S)		50S ribosomal protein L22polymer13715476.01UniProt (A0A1B2U0F3)Flavobacterium johnsoniae
25Y
(T)		50S ribosomal protein L23polymer9610690.41UniProt (A0A1J7BX85)Flavobacterium johnsoniae
26Z
(U)		50S ribosomal protein L24polymer10411439.51UniProt (A0A1B2U0F5)Flavobacterium johnsoniae
27AA
(V)		50S ribosomal protein L25polymer20321891.71UniProt (A0A1M5HDD0)Flavobacterium johnsoniae
28BA
(W)		50S ribosomal protein L27polymer869422.81UniProt (A0A1M6R2K9)Flavobacterium johnsoniae
29CA
(X)		50S ribosomal protein L28polymer788942.61UniProt (A0A1B2U1R1)Flavobacterium johnsoniae
30DA
(Y)		50S ribosomal protein L29polymer637189.51UniProt (A5FMZ2)Flavobacterium johnsoniae
31EA
(Z)		50S ribosomal protein L30polymer606644.01UniProt (A0A1M5L7Z6)Flavobacterium johnsoniae
32FA
(a)		50S ribosomal protein L31polymer849646.11UniProt (A0A1M5KIG2)Flavobacterium johnsoniae
33GA
(b)		50S ribosomal protein L32polymer647518.71UniProt (A0A1B2U029)Flavobacterium johnsoniae
34HA
(c)		50S ribosomal protein L33polymer606935.21UniProt (A0A1B2U200)Flavobacterium johnsoniae
35IA
(d)		50S ribosomal protein L34polymer536324.51UniProt (A0A1B2U1E7)Flavobacterium johnsoniae
36JA
(e)		50S ribosomal protein L35polymer657522.21UniProt (A0A1J7BZ40)Flavobacterium johnsoniae
37KA
(f)		50S ribosomal protein L36polymer384557.61UniProt (A5FMZ9)Flavobacterium johnsoniae
38LA
(h)		30S ribosomal protein S3polymer25227886.41UniProt (A0A1J7CBX1)Flavobacterium johnsoniae
39MA
(i)		30S ribosomal protein S4polymer20122950.41UniProt (A0A1B2U0J7)Flavobacterium johnsoniae
40NA
(j)		30S ribosomal protein S5polymer17318206.01UniProt (A0A1B2U0I9)Flavobacterium johnsoniae
41OA
(k)		30S ribosomal protein S6polymer11313376.41UniProt (A0A1J7BSW7)Flavobacterium johnsoniae
42PA
(l)		30S ribosomal protein S7polymer15818493.71UniProt (A0A1M5L9G3)Flavobacterium johnsoniae
43QA
(m)		30S ribosomal protein S8polymer13214652.21UniProt (A0A1M5L889)Flavobacterium johnsoniae
44RA
(n)		30S ribosomal protein S9polymer12814464.91UniProt (A0A1M6R974)Flavobacterium johnsoniae
45SA
(o)		30S ribosomal protein S10polymer10111446.61UniProt (A0A1J7CP29)Flavobacterium johnsoniae
46TA
(p)		30S ribosomal protein S11polymer12713701.01UniProt (A0A1J7CBV3)Flavobacterium johnsoniae
47UA
(q)		30S ribosomal protein S12polymer12714121.41UniProt (A0A0Q8NJJ8)Flavobacterium johnsoniae
48VA
(r)		30S ribosomal protein S13polymer12413734.21UniProt (P0A7T1)Flavobacterium johnsoniae
49WA
(s)		30S ribosomal protein S14polymer8910211.01UniProt (A0A1B2U0Q7)Flavobacterium johnsoniae
50XA
(t)		30S ribosomal protein S15polymer8810565.31UniProt (A0A1M6QTP8)Flavobacterium johnsoniae
51YA
(u)		30S ribosomal protein S16polymer18820106.61UniProt (A0A1M6QGN9)Flavobacterium johnsoniae
52ZA
(v)		30S ribosomal protein S17polymer8610108.91UniProt (A0A1M5L8M4)Flavobacterium johnsoniae
53AB
(w)		30S ribosomal protein S18polymer9811378.51UniProt (A0A1B2U6N1)Flavobacterium johnsoniae
54BB
(x)		30S ribosomal protein S19polymer9210278.91UniProt (A0A1M5L8S8)Flavobacterium johnsoniae
55CB
(y)		30S ribosomal protein S20polymer839442.21UniProt (A0A1B2U1X2)Flavobacterium johnsoniae
56DB
(z)		30S ribosomal protein S21polymer647433.81UniProt (A0A1J7CKJ9)Flavobacterium johnsoniae
Sequence modifications
1: 9 - 2870 (GenBank: 1735479352)
PDBExternal DatabaseDetails
A 342U 1505362conflict
A 406G 1505426conflict
C 429U 1505449conflict
C 645U 1505665conflict
C 925U 1505945conflict
A 1510U 1506530conflict
U 1687G 1506707conflict
U 1745C 1506765conflict
G 1746C 1506766conflict
C 1753G 1506773conflict
A 1754G 1506774conflict
U 1815C 1506835conflict
C 2098U 1507118conflict
U 2209C 1507229conflict
U 2471C 1507491conflict
U 2569C 1507589conflict
B: 1 - 274 (UniProt: A0A1B2U0Q0)
PDBExternal DatabaseDetails
Ser 35Ala 35conflict
Glu 194Ala 194conflict
C: 1 - 205 (UniProt: A0A1M5L9Q4)
PDBExternal DatabaseDetails
Ala 87Thr 87conflict
Ala 88Glu 88conflict
Ala 90Lys 90conflict
Gln 138Asn 138conflict
F: 1 - 180 (UniProt: A0A1M5L807)
PDBExternal DatabaseDetails
Ala 96Ser 96conflict
Asn 100Gln 100conflict
Ala 128Lys 128conflict
Ala 130Lys 130conflict
M: 1 - 141 (UniProt: A0A1B2U0I0)
PDBExternal DatabaseDetails
Trp 96Ala 96conflict
P: 1 - 116 (UniProt: A0A1M5PX52)
PDBExternal DatabaseDetails
Leu 115Arg 115conflict
V: 1 - 203 (UniProt: A0A1M5HDD0)
PDBExternal DatabaseDetails
Ala 66Lys 66conflict
Ile 137Leu 137conflict
Glu 139Asp 139conflict
Ala 175Cys 175conflict
X: 1 - 78 (UniProt: A0A1B2U1R1)
PDBExternal DatabaseDetails
Gln 52Ala 52conflict
Arg 53Ala 53conflict
Ala 74Glu 74conflict
r: 1 - 114 (UniProt: P0A7T1)
PDBExternal DatabaseDetails
Thr 115-expression tag
Val 116-expression tag
Ala 117-expression tag
Asn 118-expression tag
Lys 119-expression tag
Lys 120-expression tag
Lys 121-expression tag
Ala 122-expression tag
Thr 123-expression tag
Lys 124-expression tag
t: 1 - 88 (UniProt: A0A1M6QTP8)
PDBExternal DatabaseDetails
Arg 71Lys 71conflict
u: 1 - 188 (UniProt: A0A1M6QGN9)
PDBExternal DatabaseDetails
Ile 56Ala 56conflict
Gln 62Asn 62conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains56
Total formula weight2192152.2
All*Total formula weight2192152.2
*Water molecules are not included.

252091

PDB entries from 2026-04-15

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