9OWI
Structure of the A. thaliana TBP bound to TBP-AG nicked DNA site
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G, H, I... (B, E, I, J, K...) | TATA-box-binding protein 1 | polymer | 203 | 22682.6 | 6 | UniProt (P28147) Pfam (PF00352) | Arabidopsis thaliana (thale cress) | AtTBP1,TATA sequence-binding protein 1,TBP-1,TATA-binding factor 1,TATA-box factor 1,Transcription initiation factor TFIID TBP-1 subunit |
| 2 | B, E (C, F) | DNA (5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*GP*CP*GP*C)-3') | polymer | 12 | 3655.4 | 2 | synthetic construct | ||
| 3 | C, F (D, H) | DNA (5'-D(*TP*TP*TP*TP*AP*TP*AP*G)-3') | polymer | 8 | 2431.6 | 2 | synthetic construct | ||
| 4 | K, L (C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 5 | M (K) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 6 | N, O, P, Q, R... (B, C, D, E, F...) | water | water | 18.0 | 272 | Chemie (HOH) |
Sequence modifications
B, E, I, J, K, L: 1 - 200 (UniProt: P28147)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 148269.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 220.2 | |
| All* | Total formula weight | 148490.1 |
