9OW5
Hedgehog coronavirus ErinCoV-Ger12 spike receptor binding domain in complex with hedgehog APN (locally refined)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Aminopeptidase | polymer | 900 | 102756.3 | 1 | UniProt (A0A1S2ZAK1) Pfam (PF17900) Pfam (PF01433) Pfam (PF11838) | Erinaceus europaeus (western European hedgehog) | |
| 2 | B (B) | Amastatin | polymer | 4 | 474.5 | 1 | Streptomyces | ||
| 3 | C (C) | Spike glycoprotein | polymer | 210 | 23254.3 | 1 | UniProt (U5LMM7) | Betacoronavirus Erinaceus | S glycoprotein,E2,Peplomer protein |
| 4 | D, E, F, G, J... (D, E, F, G, J...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 6 | In PDB GlyTouCan (G42666HT) | |||
| 5 | H (H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 6 | I (I) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 7 | L, M, O, P (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) PubChem (24139) | |||
| 8 | N (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) PubChem (32051) | |||
| 9 | Q, R (A, C) | water | water | 18.0 | 171 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 126485.2 | |
| Branched | Number of molecules | 8 |
| Total formula weight | 3703.5 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 950.2 | |
| All* | Total formula weight | 131138.9 |
