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9OND

Crystal structure of E. coli ApaH in complex with ppAGG

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, B)
Bis(5'-nucleosyl)-tetraphosphatase [symmetrical]polymer28632160.52UniProt (P05637)
Pfam (PF00149)
Escherichia coli K-12Ap4A hydrolase,Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase,Diadenosine tetraphosphatase
2B, D
(D, E)
RNA ppAGGpolymer31054.62synthetic construct
3E, G, I, K
(A, B)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
4F, J
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5H
(B)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.31Chemie (EPE)
6L, M, N, O
(A, D, B, E)
waterwater18.0261Chemie (HOH)
Sequence modifications
A, B: 1 - 280 (UniProt: P05637)
PDBExternal DatabaseDetails
His 281-expression tag
His 282-expression tag
His 283-expression tag
His 284-expression tag
His 285-expression tag
His 286-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight66430.4
Non-Polymers*Number of molecules7
Total formula weight506.7
All*Total formula weight66937.0
*Water molecules are not included.

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PDB entries from 2025-11-05

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