9OAA
The structure of TdfH from Neisseria gonorrhoeae
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (T) | TonB-dependent receptor | polymer | 901 | 101580.9 | 1 | UniProt (Q5F845) Pfam (PF07715) Pfam (PF00593) | Neisseria gonorrhoeae FA 1090 | |
| 2 | B, D (A, C) | Protein S100-A8 | polymer | 93 | 10789.4 | 2 | UniProt (P05109) Pfam (PF01023) | Homo sapiens (human) | Calgranulin-A,Calprotectin L1L subunit,Cystic fibrosis antigen,CFAG,Leukocyte L1 complex light chain,Migration inhibitory factor-related protein 8,MRP-8,p8,S100 calcium-binding protein A8,Urinary stone protein band A |
| 3 | C, E (B, D) | Protein S100-A9 | polymer | 114 | 13212.0 | 2 | UniProt (P06702) Pfam (PF01023) | Homo sapiens (human) | Calgranulin-B,Calprotectin L1H subunit,Leukocyte L1 complex heavy chain,Migration inhibitory factor-related protein 14,MRP-14,p14,S100 calcium-binding protein A9 |
| 4 | F, H, I, J, K (A, B, C, D) | CALCIUM ION | non-polymer | 40.1 | 5 | Chemie (CA) | |||
| 5 | G (B) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) |
Sequence modifications
T: 26 - 922 (UniProt: Q5F845)
A, C: 1 - 93 (UniProt: P05109)
B, D: 1 - 114 (UniProt: P06702)
| PDB | External Database | Details |
|---|---|---|
| Gly 22 | - | expression tag |
| Ala 23 | - | expression tag |
| Met 24 | - | expression tag |
| Gly 25 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 42 | Cys 42 | conflict |
| Asn 83 | His 83 | conflict |
| Asn 87 | His 87 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Asn 20 | His 20 | conflict |
| Ser 30 | Asp 30 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 149583.6 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 265.8 | |
| All* | Total formula weight | 149849.4 |
