9O8Y
Crystal structure of 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) from Bordetella pertussis (succinyl-CoA bound)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase | polymer | 278 | 29967.0 | 3 | UniProt (P0A4U8) Pfam (PF14805) Pfam (PF14602) | Bordetella pertussis Tohama I | Tetrahydrodipicolinate N-succinyltransferase,THDP succinyltransferase,THP succinyltransferase,Tetrahydropicolinate succinylase |
| 2 | D, E, G, H, I (A, B, C) | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
| 3 | F (A) | SUCCINYL-COENZYME A | non-polymer | 867.6 | 1 | Chemie (SCA) | |||
| 4 | J, K, L (A, B, C) | water | water | 18.0 | 686 | Chemie (HOH) |
Sequence modifications
A, B, C: 2 - 271 (UniProt: P0A4U8)
| PDB | External Database | Details |
|---|---|---|
| Met -6 | - | initiating methionine |
| Ala -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| His 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 89901.0 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1044.9 | |
| All* | Total formula weight | 90945.8 |
