9O2U
BG505 SOSIP in complex with 007 bNAb IgG1 - trimer-dimer class
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, M, O... (A, C, E, O, Q...) | Envelope glycoprotein gp120 | polymer | 476 | 53392.5 | 6 | UniProt (Q2N0S6) | Human immunodeficiency virus 1 | |
| 2 | B, D, F, N, P... (B, D, F, P, R...) | Envelope glycoprotein gp41 | polymer | 156 | 17618.1 | 6 | UniProt (Q2N0S6) | Human immunodeficiency virus 1 | |
| 3 | G, H, K, S, U... (H, J, M, U, W...) | 007 IgG1 Heavy Chain | polymer | 458 | 50497.0 | 6 | Homo sapiens (human) | ||
| 4 | I, J, L, T, V... (K, L, N, V, X...) | 007 Light Chain | polymer | 214 | 23500.3 | 6 | Homo sapiens (human) | ||
| 5 | EA, HB, KA, QA, WA... (e, 7, k, q, w...) | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1438.3 | 6 | In PDB | |||
| 6 | CB, FA, LA, RA, XA... (2, f, l, r, x...) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 6 | In PDB GlyTouCan (G09724ZC) | |||
| 7 | AA, AB, BA, BB, CA... (a, 0, b, 1, c...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 24 | In PDB GlyTouCan (G42666HT) | |||
| 8 | AC, AD, BC, BD, CC... (E, S, T, F, O...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 48 | Chemie (NAG) |
Sequence modifications
A, C, E, O, Q, S: 33 - 510 (UniProt: Q2N0S6)
B, D, F, P, R, T: 511 - 664 (UniProt: Q2N0S6)
| PDB | External Database | Details |
|---|---|---|
| Asn 332 | Thr 330 | conflict |
| Cys 501 | Ala 498 | conflict |
| Arg 509 | Glu 506 | conflict |
| Arg 510 | Lys 507 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Arg 509 | - | expression tag |
| Arg 510 | - | expression tag |
| Pro 559 | Ile 556 | conflict |
| Cys 605 | Thr 602 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 24 |
| Total formula weight | 870047.3 | |
| Branched | Number of molecules | 36 |
| Total formula weight | 25253.2 | |
| Non-Polymers* | Number of molecules | 48 |
| Total formula weight | 10618.0 | |
| All* | Total formula weight | 905918.5 |
