9NYF
Cryo-EM structure of the glycosyltransferase GtrB (tetramer volume)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (B, A, C, D) | Glycosyltransferase sll0501 | polymer | 345 | 39872.0 | 4 | UniProt (Q55487) Pfam (PF00535) | Synechocystis sp. PCC 6803 substr. Kazusa | |
| 2 | E, H, K, N (B, A, C, D) | URIDINE-5'-DIPHOSPHATE-GLUCOSE | non-polymer | 566.3 | 4 | Chemie (UPG) PubChem (16667381) PubChem (20776702) PubChem (20776703) PubChem (1166) PubChem (25011746) PubChem (16760700) PubChem (20776705) PubChem (20776706) PubChem (45109771) PubChem (23724458) PubChem (46226441) PubChem (46936243) PubChem (53477679) PubChem (56845790) PubChem (58538034) PubChem (439156) PubChem (59720988) PubChem (448801) PubChem (56650783) PubChem (56846106) PubChem (88869506) PubChem (88869507) PubChem (88869743) PubChem (88870643) PubChem (88883029) PubChem (88910951) PubChem (88941526) PubChem (89321600) PubChem (89360378) PubChem (89847362) PubChem (90056247) PubChem (8629) PubChem (18068) PubChem (439158) PubChem (448873) PubChem (640055) PubChem (90950359) PubChem (92328335) PubChem (92974127) PubChem (91746280) PubChem (6857410) PubChem (124933210) PubChem (92974126) PubChem (92974128) PubChem (92974129) PubChem (93535589) PubChem (129850353) PubChem (6857540) PubChem (102429624) PubChem (11734460) PubChem (12133414) PubChem (13008857) PubChem (13987142) PubChem (124933209) PubChem (155893098) PubChem (158571248) PubChem (162920685) PubChem (168265389) PubChem (134736387) PubChem (134736388) PubChem (138911444) PubChem (162920683) PubChem (162920684) PubChem (163626061) PubChem (166642644) PubChem (168720052) PubChem (174027848) | |||
| 3 | F, I, L, O (B, A, C, D) | [(2~{E},6~{E},10~{E},14~{E},18~{Z},22~{E},26~{Z},30~{E},34~{E},38~{E})-3,7,11,15,19,23,27,31,35,39,43-undecamethyltetratetraconta-2,6,10,14,18,22,26,30,34,38,42-undecaenyl] dihydrogen phosphate | non-polymer | 847.3 | 4 | Chemie (5TR) PubChem (1173) PubChem (5283548) PubChem (5280338) PubChem (117587708) PubChem (100979316) PubChem (11354952) PubChem (11388871) | |||
| 4 | G, J, M, P (B, A, C, D) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) PubChem (888) |
Sequence modifications
B, A, C, D: 2 - 318 (UniProt: Q55487)
| PDB | External Database | Details |
|---|---|---|
| Met -26 | - | expression tag |
| His -25 | - | expression tag |
| His -24 | - | expression tag |
| His -23 | - | expression tag |
| His -22 | - | expression tag |
| His -21 | - | expression tag |
| His -20 | - | expression tag |
| His -19 | - | expression tag |
| His -18 | - | expression tag |
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| Ser -15 | - | expression tag |
| Ser -14 | - | expression tag |
| Gly -13 | - | expression tag |
| Val -12 | - | expression tag |
| Asp -11 | - | expression tag |
| Leu -10 | - | expression tag |
| Gly -9 | - | expression tag |
| Thr -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Asn -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Tyr -4 | - | expression tag |
| Phe -3 | - | expression tag |
| Gln -2 | - | expression tag |
| Ser -1 | - | expression tag |
| Asn 0 | - | expression tag |
| Ala 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 159488.1 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 5751.6 | |
| All* | Total formula weight | 165239.6 |
