9NVE
Crystal structure of NP203 TCR in complex with NP366-H-2Db
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | NP203 TCR alpha-chain | polymer | 223 | 24894.7 | 1 | Mus musculus (mouse) | ||
| 2 | B (B) | NP203 TCR beta-chain | polymer | 254 | 28891.4 | 1 | Mus musculus (mouse) | ||
| 3 | C (C) | H-2 class I histocompatibility antigen, D-B alpha chain | polymer | 281 | 32601.3 | 1 | UniProt (P01899) Pfam (PF00129) Pfam (PF07654) | Mus musculus (house mouse) | H-2D(B) |
| 4 | D (D) | Beta-2-microglobulin | polymer | 100 | 11835.6 | 1 | UniProt (P01887) Pfam (PF07654) | Mus musculus (house mouse) | |
| 5 | E (P) | Nucleoprotein peptide | polymer | 9 | 1026.1 | 1 | UniProt (Q9Q0U8) | Influenza A virus | Nucleocapsid protein,Protein N |
| 6 | F (E) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 7 | G, J (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) PubChem (24139) | |||
| 8 | H, K, L, M (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 9 | I, N, O (A, B, D) | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) PubChem (312) | |||
| 10 | P, Q, R, S, T (A, B, C, D, P) | water | water | 18.0 | 143 | Chemie (HOH) |
Sequence modifications
C: 1 - 280 (UniProt: P01899)
D: 1 - 99 (UniProt: P01887)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| Asp 85 | Ala 105 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 99249.0 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 797.0 | |
| All* | Total formula weight | 100470.5 |
