9NV2

Crystal structure of NP207 TCR in complex with NP366-H-2Db

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	NP207 TCR alpha-chain	polymer	223	24866.7	1		Mus musculus (mouse)
2	B (B)	NP207 TCR beta-chain	polymer	254	28877.4	1		Mus musculus (mouse)
3	C (C)	H-2 class I histocompatibility antigen, D-B alpha chain	polymer	281	32601.3	1	UniProt (P01899) Pfam (PF00129) Pfam (PF07654)	Mus musculus (house mouse)	H-2D(B)
4	D (D)	Beta-2-microglobulin	polymer	100	11835.6	1	UniProt (P01887) Pfam (PF07654)	Mus musculus (house mouse)
5	E (P)	Nucleoprotein peptide	polymer	9	1026.1	1	UniProt (Q9Q0U8)	Influenza A virus	Nucleocapsid protein,Protein N
6	F (E)	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		586.5	1	In PDB GlyTouCan (G15407YE)
7	G, H, I, N (A, B)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	4	Chemie (NAG) PubChem (24139)
8	J, K, L, O, Q... (A, B, C, D)	1,2-ETHANEDIOL	non-polymer		62.1	10	Chemie (EDO)
9	M, P, U (A, B, C)	CHLORIDE ION	non-polymer		35.5	3	Chemie (CL) PubChem (312)
10	AA, BA, X, Y, Z (D, P, A, B, C)	water	water		18.0	251	Chemie (HOH)

Sequence modifications

C: 1 - 280 (UniProt: P01899)

PDB	External Database	Details
Met 0	-	initiating methionine

D: 1 - 99 (UniProt: P01887)

PDB	External Database	Details
Met 0	-	initiating methionine
Asp 85	Ala 105	variant

Contents of the asymmetric unit

Polymers	Number of chains	5
	Total formula weight	99207.0
Branched	Number of molecules	1
	Total formula weight	586.5
Non-Polymers*	Number of molecules	17
	Total formula weight	1611.9
All*	Total formula weight	101405.4

*Water molecules are not included.