9NUG

D-Ornithine/D-lysine decarboxylase C387A complexed with putrescine, D-arginine and agmatine

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B (A, B)	D-ornithine/D-lysine decarboxylase	polymer	478	54144.1	2	UniProt (Q8ZNC4)	Salmonella enterica subsp. enterica serovar Typhimurium	D-Orn/D-Lys decarboxylase,DOKDC
2	C, D, E, I (A, B)	DIMETHYL SULFOXIDE	non-polymer		78.1	4	Chemie (DMS) PubChem (679)
3	F, K (A, B)	(E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-D-arginine	non-polymer		403.3	2	Chemie (5DK)
4	G, M (A, B)	[(4R)-4-{(E)-[(4-carbamimidamidobutyl)imino]methyl}-6-methyl-5-oxo-4,5-dihydropyridin-3-yl]methyl dihydrogen phosphate	non-polymer		359.3	2	Chemie (A1B68)
5	H, N (A, B)	POTASSIUM ION	non-polymer		39.1	2	Chemie (K) PubChem (813)
6	J (B)	CHLORIDE ION	non-polymer		35.5	1	Chemie (CL) PubChem (312)
7	L (B)	1,4-DIAMINOBUTANE	non-polymer		88.2	1	Chemie (PUT) PubChem (1045)
8	O, P (A, B)	water	water		18.0	694	Chemie (HOH)

Sequence modifications

A, B: 1 - 465 (UniProt: Q8ZNC4)

PDB	External Database	Details
Ala 387	Cys 387	engineered mutation
Leu 466	-	expression tag
Leu 467	-	expression tag
Ala 468	-	expression tag
Ala 469	-	expression tag
Ala 470	-	expression tag
Leu 471	-	expression tag
Glu 472	-	expression tag
His 473	-	expression tag
His 474	-	expression tag
His 475	-	expression tag
His 476	-	expression tag
His 477	-	expression tag
His 478	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	108288.2
Non-Polymers*	Number of molecules	12
	Total formula weight	2039.6
All*	Total formula weight	110327.8

*Water molecules are not included.