9NRB
Crystal structure of H5 hemagglutinin Q226L mutant from the influenza virus A/duck/France/1611008h/16 with LSTc
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E (A, C, E) | Hemagglutinin HA1 chain | polymer | 328 | 36976.9 | 3 | UniProt (A0A6M2RJB8) Pfam (PF00509) | Influenza A virus | |
2 | B, D, F (B, D, F) | Hemagglutinin HA2 chain | polymer | 177 | 20414.5 | 3 | UniProt (A0A6M2RJB8) Pfam (PF00509) | Influenza A virus | |
3 | G, H, J (G, H, J) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
4 | I (I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
5 | K (K) | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose | branched | 836.7 | 1 | In PDB GlyTouCan (G03309JT) | |||
6 | L, M, N, O, P... (A, C, D, E) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
7 | R, S, T, U, V... (A, B, C, D, E...) | water | water | 18.0 | 62 | Chemie (HOH) |
Sequence modifications
A, C, E: 11 - 328 (UniProt: A0A6M2RJB8)
B, D, F: 1 - 173 (UniProt: A0A6M2RJB8)
PDB | External Database | Details |
---|---|---|
Asp 8 | - | expression tag |
Pro 9 | - | expression tag |
Gly 10 | - | expression tag |
Leu 226 | Gln 238 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Ser 174 | - | expression tag |
Ser 175 | - | expression tag |
Gly 176 | - | expression tag |
Arg 177 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 172174.3 | |
Branched | Number of molecules | 5 |
Total formula weight | 3020.8 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 1327.2 | |
All* | Total formula weight | 176522.3 |