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9NLJ

E.coli Initiation complex with Uup-EQ2

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(13)
Large ribosomal subunit protein uL13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
Escherichia coli50S ribosomal protein L13
2B
(14)
50S ribosomal protein L14polymer12213451.91UniProt (S1NW45)
Pfam (PF00238)
UniProt (by SIFTS) (P0ADY3)
Escherichia coli
3C
(15)
Large ribosomal subunit protein uL15polymer14415008.51UniProt (P02413)
Pfam (PF00828)
Escherichia coli50S ribosomal protein L15
4D
(16)
50S ribosomal protein L16polymer13615312.31UniProt (P0ADY7)
Pfam (PF00252)
Escherichia coliLarge ribosomal subunit protein uL16
5E
(17)
Large ribosomal subunit protein bL17polymer12013721.91UniProt (P0AG44)
Pfam (PF01196)
Escherichia coli50S ribosomal protein L17
6F
(18)
Large ribosomal subunit protein uL18polymer11612663.51UniProt (P0C018)
Pfam (PF00861)
Escherichia coli50S ribosomal protein L18
7G
(19)
50S ribosomal protein L19polymer11413028.11UniProt (S1PSA3)
Pfam (PF01245)
UniProt (by SIFTS) (P0A7K6)
Escherichia coli
8H
(2)
50S ribosomal protein L2polymer27129663.21UniProt (P60422)
Pfam (PF03947)
Pfam (PF00181)
Escherichia coliLarge ribosomal subunit protein uL2
9I
(20)
Large ribosomal subunit protein bL20polymer11713396.81UniProt (C3T7Q7)
Pfam (PF00453)
UniProt (by SIFTS) (P0A7L3)
Escherichia coli
10J
(21)
Large ribosomal subunit protein bL21polymer10311586.41UniProt (Q1R6F0)
Pfam (PF00829)
UniProt (by SIFTS) (P0AG48)
Escherichia coli50S ribosomal protein L21
11K
(22)
Large ribosomal subunit protein uL22polymer11012253.41UniProt (Q1R610)
Pfam (PF00237)
UniProt (by SIFTS) (P61175)
Escherichia coli50S ribosomal protein L22
12L
(23)
Large ribosomal subunit protein uL23polymer9310546.51UniProt (C3SQV2)
Pfam (PF00276)
UniProt (by SIFTS) (P0ADZ0)
Escherichia coli
13M
(24)
Large ribosomal subunit protein uL24polymer10211078.91UniProt (A0A7U9LWC1)
Pfam (PF00467)
Pfam (PF17136)
UniProt (by SIFTS) (P60624)
Escherichia coli50S ribosomal protein L24
14N
(25)
Large ribosomal subunit protein bL25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
Escherichia coli
15O
(27)
Large ribosomal subunit protein bL27polymer859146.51UniProt (P0A7M0)
Pfam (PF01016)
UniProt (by SIFTS) (P0A7L8)
Escherichia coli
16P
(28)
50S ribosomal protein L28polymer778896.41UniProt (A0A0E2KZD0)
Pfam (PF00830)
UniProt (by SIFTS) (P0A7M2)
Escherichia coli
17Q
(29)
Large ribosomal subunit protein uL29polymer637286.51UniProt (C3SQY2)
Pfam (PF00831)
UniProt (by SIFTS) (P0A7M6)
Escherichia coli
18R
(3)
50S ribosomal protein L3polymer20922277.51UniProt (P60438)
Pfam (PF00297)
Escherichia coliLarge ribosomal subunit protein uL3
19S
(30)
50S ribosomal protein L30polymer586423.61UniProt (P0AG51)
Pfam (PF00327)
Escherichia coliLarge ribosomal subunit protein uL30
20T
(31)
Large ribosomal subunit protein bL31polymer667516.71UniProt (P0A7M9)
Pfam (PF01197)
Escherichia coli50S ribosomal protein L31
21U
(32)
50S ribosomal protein L32polymer566332.21UniProt (A0A828UBL8)
Pfam (PF01783)
UniProt (by SIFTS) (P0A7N4)
Escherichia coli
22V
(33)
Large ribosomal subunit protein bL33polymer505814.81UniProt (P0A7N9)
Pfam (PF00471)
Escherichia coli50S ribosomal protein L33
23W
(34)
50S ribosomal protein L34polymer465397.51UniProt (B7MGC4)
Pfam (PF00468)
UniProt (by SIFTS) (P0A7P5)
Escherichia coli
24X
(35)
Large ribosomal subunit protein bL35polymer647181.81UniProt (P0A7Q2)
Pfam (PF01632)
UniProt (by SIFTS) (P0A7Q1)
Escherichia coli
25Y
(36)
50S ribosomal protein L36polymer384377.41UniProt (A0A0E2L017)
Pfam (PF00444)
UniProt (by SIFTS) (P0A7Q6)
Escherichia coli
26Z
(4)
Large ribosomal subunit protein uL4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
Escherichia coli50S ribosomal protein L4
27AA
(5)
50S ribosomal protein L5polymer17720073.21UniProt (A0A4P8BX24)
Pfam (PF00281)
Pfam (PF00673)
UniProt (by SIFTS) (P62399)
Escherichia coli
28BA
(6)
Large ribosomal subunit protein uL6polymer17618801.61UniProt (C3SR17)
Pfam (PF00347)
UniProt (by SIFTS) (P0AG55)
Escherichia coli
29CA
(9)
Large ribosomal subunit protein bL9polymer14915789.01UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
Escherichia coli50S ribosomal protein L9
30DA
(R1)
23S ribosomal RNApolymer2903941322.21Escherichia coli
31EA
(R2)
5S ribosomal RNApolymer11938483.91GenBank (1815787944)Escherichia coli
32FA
(R3)
16S ribosomal RNApolymer1531496258.01GenBank (2852409670)Escherichia coli
33GA
(sb)
Small ribosomal subunit protein uS2polymer21824253.91UniProt (P0A7V0)
Pfam (PF00318)
Escherichia coli30S ribosomal protein S2
34HA
(sc)
Small ribosomal subunit protein uS3polymer20623078.81UniProt (P0A7V5)
Pfam (PF07650)
Pfam (PF00189)
UniProt (by SIFTS) (P0A7V3)
Escherichia coli30S ribosomal protein S3
35IA
(sd)
30S ribosomal protein S4polymer20523383.01UniProt (C3SR62)
Pfam (PF00163)
Pfam (PF01479)
UniProt (by SIFTS) (P0A7V8)
Escherichia coli
36JA
(se)
Small ribosomal subunit protein uS5polymer15716532.11UniProt (P0A7W1)
Pfam (PF00333)
Pfam (PF03719)
Escherichia coli30S ribosomal protein S5
37KA
(sf)
30S ribosomal protein S6, non-modified isoformpolymer10011669.41UniProt (P02358)
Pfam (PF01250)
Escherichia coli
38LA
(sg)
30S ribosomal protein S7polymer15116861.51UniProt (P02359)
Pfam (PF00177)
Escherichia coliSmall ribosomal subunit protein uS7
39MA
(sh)
30S ribosomal protein S8polymer12914015.41UniProt (A0A828U358)
Pfam (PF00410)
UniProt (by SIFTS) (P0A7W7)
Escherichia coli
40NA
(si)
Small ribosomal subunit protein uS9polymer12714554.91UniProt (C3SRY2)
Pfam (PF00380)
UniProt (by SIFTS) (P0A7X3)
Escherichia coli
41OA
(sj)
30S ribosomal protein S10polymer9811197.01UniProt (A0A0H3EQD3)
Pfam (PF00338)
UniProt (by SIFTS) (P0A7R5)
Escherichia coli
42PA
(sk)
Small ribosomal subunit protein uS11polymer11612388.11UniProt (C3SR57)
Pfam (PF00411)
UniProt (by SIFTS) (P0A7R9)
Escherichia coli
43QA
(sl)
Small ribosomal subunit protein uS12polymer12313637.01UniProt (C3SQR7)
Pfam (PF00164)
UniProt (by SIFTS) (P0A7S3)
Escherichia coli
44RA
(sm)
30S ribosomal protein S13polymer11412625.81UniProt (S1P5F8)
Pfam (PF00416)
UniProt (by SIFTS) (P0A7S9)
Escherichia coli
45SA
(sn)
Small ribosomal subunit protein uS14polymer10011475.41UniProt (A0A8S0FJJ0)
Pfam (PF00253)
UniProt (by SIFTS) (P0AG59)
Escherichia coli
46TA
(so)
Small ribosomal subunit protein uS15polymer8810159.61UniProt (P0ADZ4)
Pfam (PF00312)
Escherichia coli30S ribosomal protein S15
47UA
(sp)
Small ribosomal subunit protein bS16polymer829207.61UniProt (C3SYP2)
Pfam (PF00886)
UniProt (by SIFTS) (P0A7T3)
Escherichia coli
48VA
(sq)
Small ribosomal subunit protein uS17polymer809263.91UniProt (P0AG63)
Pfam (PF00366)
Escherichia coli30S ribosomal protein S17
49WA
(sr)
30S ribosomal protein S18polymer657606.81UniProt (E0J6I2)
Pfam (PF01084)
UniProt (by SIFTS) (P0A7T7)
Escherichia coli
50XA
(ss)
30S ribosomal protein S19polymer799057.61UniProt (A0A7U9LGZ0)
Pfam (PF00203)
UniProt (by SIFTS) (P0A7U3)
Escherichia coli
51YA
(st)
30S ribosomal protein S20polymer859506.21UniProt (C3TRH7)
Pfam (PF01649)
UniProt (by SIFTS) (P0A7U7)
Escherichia coli
52ZA
(su)
Small ribosomal subunit protein bS21polymer657763.11UniProt (P68679)
Pfam (PF01165)
Escherichia coli30S ribosomal protein S21
53AB
(T)
tRNApolymer7824967.11Escherichia coli
54BB
(U)
Uuppolymer53761159.51Pfam (PF00005)
Pfam (PF12848)
UniProt (by SIFTS) (P43672)
Escherichia coli
55CB
(1)
Large ribosomal subunit protein uL1polymer22023392.11UniProt (P0A7L0)
Pfam (PF00687)
Escherichia coli50S ribosomal protein L1
56DB
(M)
mRNApolymer92886.81Escherichia coli
57AC, AD, AE, AF, AG...
(R1, R3, 15, 2, 20...)
MAGNESIUM IONnon-polymer24.3277Chemie (MG)
58VL, WL
(U)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.22Chemie (ATP)
59XL, YL
(U)
SODIUM IONnon-polymer23.02Chemie (NA)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains56
Total formula weight2222618.2
Non-Polymers*Number of molecules281
Total formula weight7792.8
All*Total formula weight2230411.1
*Water molecules are not included.

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PDB entries from 2025-05-28

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