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9NIN

The structure of human Vacuolar Protein Sorting 34 catalytic domain bound to RD-I-86

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Phosphatidylinositol 3-kinase catalytic subunit type 3polymer59468149.91UniProt (Q8NEB9)
Pfam (PF00613)
Pfam (PF00454)
Homo sapiens (human)PI3-kinase type 3,PI3K type 3,PtdIns-3-kinase type 3,Phosphatidylinositol 3-kinase p100 subunit,Phosphoinositide-3-kinase class 3,hVps34
2B
(A)
2-[(8R)-pyrazolo[1,5-a]pyrimidin-3-yl]-1,3-benzothiazol-6-olnon-polymer268.31Chemie (A1BYW)
3C, G
(A)
ACETATE IONnon-polymer59.02Chemie (ACT)
4D, E, F, I
(A)
1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
5H
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
6J, K, L, M, N...
(A)
CHLORIDE IONnon-polymer35.514Chemie (CL)
7X
(A)
POTASSIUM IONnon-polymer39.11Chemie (K)
8Y
(A)
waterwater18.0281Chemie (HOH)
Sequence modifications
A: 290 - 871 (UniProt: Q8NEB9)
PDBExternal DatabaseDetails
Met 278-expression tag
Gly 279-expression tag
His 280-expression tag
His 281-expression tag
His 282-expression tag
His 283-expression tag
His 284-expression tag
His 285-expression tag
His 286-expression tag
His 287-expression tag
His 288-expression tag
His 289-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight68149.9
Non-Polymers*Number of molecules23
Total formula weight1276.2
All*Total formula weight69426.1
*Water molecules are not included.

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PDB entries from 2026-03-18

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