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9NE9

Human polymerase epsilon bound to PCNA and DNA with a pre-existing mismatch in the blocked conformation I

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase epsilon catalytic subunit Apolymer1172135390.71UniProt (Q07864)
Pfam (PF03104)
Pfam (PF22634)
Homo sapiens (human)3'-5' exodeoxyribonuclease,DNA polymerase II subunit A
2B, C, D
(B, C, D)
Proliferating cell nuclear antigenpolymer26128795.83UniProt (P12004)
Pfam (PF00705)
Pfam (PF02747)
Homo sapiens (human)PCNA,Cyclin
3E
(P)
DNA (35-MER)polymer329908.41synthetic construct
4F
(T)
DNA (49-MER)polymer3310115.61synthetic construct
5G, H
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6I
(A)
IRON/SULFUR CLUSTERnon-polymer351.61Chemie (SF4)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight241801.9
Non-Polymers*Number of molecules3
Total formula weight400.3
All*Total formula weight242202.2
*Water molecules are not included.

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PDB entries from 2025-07-30

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