9N07
Mfd-bound E.coli RNA polymerase elongation complex + ADP-BeF3 - L1 state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Transcription-repair-coupling factor | polymer | 1166 | 132234.7 | 1 | UniProt (A0A024L3Y3) Pfam (PF17757) Pfam (PF21132) Pfam (PF02559) Pfam (PF00270) Pfam (PF00271) Pfam (PF03461) UniProt (by SIFTS) (P30958) | Escherichia coli | TRCF |
| 2 | B, C (G, H) | DNA-directed RNA polymerase subunit alpha | polymer | 234 | 25897.5 | 2 | UniProt (A0A5B9AW69) Pfam (PF01193) Pfam (PF01000) UniProt (by SIFTS) (P0A7Z4) | Escherichia coli | RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha |
| 3 | D (I) | DNA-directed RNA polymerase subunit beta | polymer | 1340 | 150560.6 | 1 | UniProt (C3SIA7) Pfam (PF04561) Pfam (PF04565) Pfam (PF10385) Pfam (PF00562) Pfam (PF04560) Pfam (PF04563) UniProt (by SIFTS) (P0A8V2) | Escherichia coli | |
| 4 | E (J) | DNA-directed RNA polymerase subunit beta | polymer | 1359 | 150507.4 | 1 | UniProt (A0AAW8PRI5) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) UniProt (by SIFTS) (P0A8T7) | Escherichia coli | |
| 5 | F (K) | DNA-directed RNA polymerase subunit omega | polymer | 91 | 10249.5 | 1 | UniProt (P0A800) Pfam (PF01192) | Escherichia coli | RNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega |
| 6 | G (N) | DNA (49-MER) | polymer | 64 | 19748.6 | 1 | synthetic construct | ||
| 7 | H (R) | RNA (5'-R(P*GP*GP*AP*GP*AP*GP*GP*UP*A)-3') | polymer | 20 | 6510.0 | 1 | synthetic construct | ||
| 8 | I (T) | DNA (55-MER) | polymer | 64 | 19630.5 | 1 | synthetic construct | ||
| 9 | J (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 10 | K (A) | BERYLLIUM TRIFLUORIDE ION | non-polymer | 66.0 | 1 | Chemie (BEF) | |||
| 11 | L (J) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 12 | M, N (J) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence modifications
A: 1 - 1148 (UniProt: A0A024L3Y3)
| PDB | External Database | Details |
|---|---|---|
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| Ser -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Gly -9 | - | expression tag |
| Leu -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Val -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Phe -4 | - | expression tag |
| Gln -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 541236.2 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 648.3 | |
| All* | Total formula weight | 541884.6 |
