9MXC
Cryo-EM Structure of Human Enterovirus D68 USA/IL/14-18952 in Complex with Fc-MFSD6(L3)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | viral protein 1 | polymer | 297 | 32854.2 | 1 | UniProt (A0A1I9KHM1) Pfam (PF22663) UniProt (by SIFTS) (A0A097HUV1) | enterovirus D68 | |
| 2 | B (B) | viral protein 2 | polymer | 237 | 26527.1 | 1 | UniProt (A0A1B0T636) Pfam (PF00073) UniProt (by SIFTS) (A0A191Z5D8) | enterovirus D68 | |
| 3 | C (C) | viral protein 3 | polymer | 247 | 27156.9 | 1 | UniProt (A0A097BW17) Pfam (PF00073) UniProt (by SIFTS) (A0A1B3ILI7) | enterovirus D68 | |
| 4 | D (D) | viral protein 4 | polymer | 30 | 3401.7 | 1 | UniProt (Q68T42) Pfam (PF02226) | enterovirus D68 | P1A,Virion protein 4 |
| 5 | E (E) | Major facilitator superfamily domain-containing protein 6 | polymer | 9 | 1072.2 | 1 | UniProt (Q6ZSS7) | Homo sapiens (human) | Macrophage MHC class I receptor 2 homolog |
| 6 | F (F) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 1 | In PDB GlyTouCan (G82348BZ) | |||
| 7 | G, H, I (A, B, C) | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
| 8 | J, K, L, M, N (A, B, C, D, E) | water | water | 18.0 | 127 | Chemie (HOH) |
Sequence modifications
A: 1001 - 1297 (UniProt: A0A1I9KHM1)
| PDB | External Database | Details |
|---|---|---|
| Gly 1271 | Glu 835 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 91012.1 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 1057.0 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 69.0 | |
| All* | Total formula weight | 92138.1 |
