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9MXB

Crystal Structure of WT HIV-1 Reverse Transcriptase in Complex with 5-{2-[2-(2-oxo-4-sulfanylidene-3,4-dihydropyrimidin-1(2H)-yl)ethoxy] phenoxy}naphthalene-2-carbonitrile (JLJ648), a non-nucleoside inhibitor

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Reverse transcriptase/ribonuclease Hpolymer55763989.21UniProt (P03366)Human immunodeficiency virus 1Exoribonuclease H, p66 RT
2B
(B)
p51 RTpolymer42850119.51UniProt (P03366)Human immunodeficiency virus 1
3C, D, G
(A, B)
CHLORIDE IONnon-polymer35.53Chemie (CL)
4E, H
(A, B)
SULFATE IONnon-polymer96.12Chemie (SO4)
5F
(A)
5-{2-[2-(2-oxo-4-sulfanylidene-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}naphthalene-2-carbonitrilenon-polymer415.51Chemie (A1BTU)
6I, J
(A, B)
waterwater18.021Chemie (HOH)
Sequence modifications
A: 1 - 555 (UniProt: P03366)
PDBExternal DatabaseDetails
Met -1-expression tag
Val 0-expression tag
Ala 172Lys 771engineered mutation
Ala 173Lys 772engineered mutation
Ser 280Cys 879engineered mutation
B: 1 - 428 (UniProt: P03366)
PDBExternal DatabaseDetails
Ser 280Cys 879engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight114108.7
Non-Polymers*Number of molecules6
Total formula weight713.9
All*Total formula weight114822.7
*Water molecules are not included.

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PDB entries from 2026-02-25

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