Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

9MR4

NAC: Ribosome nascent chain complex(Oxa1L)

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (m)	Ubiquitin-ribosomal protein eL40 fusion protein	polymer	128	14758.4	1	UniProt (P0DXC2) Pfam (PF00240) Pfam (PF01020)	Oryctolagus cuniculus (rabbit)	Ubiquitin A-52 residue ribosomal protein fusion product 1
2	B (0)	Ribosomal protein S27a	polymer	156	18004.0	1	UniProt (G1SK22) Pfam (PF00240) Pfam (PF01599)	Oryctolagus cuniculus (rabbit)
3	C (4)	mRNA	polymer	6	1892.2	1		Oryctolagus cuniculus (rabbit)
4	D (6)	RACK1	polymer	317	35115.7	1	UniProt (G1SJB4) Pfam (PF00400)	Oryctolagus cuniculus (rabbit)
5	E (7)	5S rRNA	polymer	120	38691.9	1	GenBank (X06789.1)	Oryctolagus cuniculus (rabbit)
6	F (9)	eS29	polymer	56	6690.8	1	UniProt (G1U7M4) Pfam (PF00253)	Oryctolagus cuniculus (rabbit)
7	G (A)	Ribosomal protein L8	polymer	257	28088.9	1	UniProt (G1TT27) Pfam (PF00181) Pfam (PF03947)	Oryctolagus cuniculus (rabbit)
8	H (B)	Ribosomal protein L3	polymer	403	46108.0	1	UniProt (G1TL06) Pfam (PF00297)	Oryctolagus cuniculus (rabbit)
9	I (C)	60S ribosomal protein L4	polymer	413	46388.9	1	UniProt (G1SVW5) Pfam (PF00573) Pfam (PF14374)	Oryctolagus cuniculus (rabbit)
10	J (D)	Large ribosomal subunit protein uL18	polymer	297	34481.8	1	UniProt (P19949) Pfam (PF17144) Pfam (PF14204)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L5
11	K (F)	uL30	polymer	249	29514.3	1	UniProt (G1SV32) Pfam (PF08079) Pfam (PF00327)	Oryctolagus cuniculus (rabbit)
12	L (G)	60S ribosomal protein L7a	polymer	319	36267.6	1	UniProt (G1STW0) Pfam (PF01248)	Oryctolagus cuniculus (rabbit)
13	M (H)	60S ribosomal protein L9	polymer	192	21871.4	1	UniProt (G1SWI6) Pfam (PF00347)	Oryctolagus cuniculus (rabbit)
14	N (I)	60S ribosomal protein L10	polymer	214	24643.1	1	UniProt (B7NZQ2) Pfam (PF00252)	Oryctolagus cuniculus (rabbit)	Ribosomal protein L10 (Predicted)
15	O (J)	Ribosomal protein L11	polymer	178	20288.5	1	UniProt (G1TUB8) Pfam (PF00281) Pfam (PF00673)	Oryctolagus cuniculus (rabbit)
16	P (K)	18S rRNA	polymer	4592	1481847.5	1		Oryctolagus cuniculus (rabbit)
17	Q (L)	Large ribosomal subunit protein eL13	polymer	211	24293.6	1	UniProt (G1TKB3) Pfam (PF01294)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L13
18	R (M)	60S ribosomal protein L14	polymer	218	23870.5	1	UniProt (G1SZ12) Pfam (PF01929)	Oryctolagus cuniculus (rabbit)
19	S (N)	Ribosomal protein L15	polymer	204	24207.3	1	UniProt (G1T0C1) Pfam (PF00827)	Oryctolagus cuniculus (rabbit)
20	T (O)	Large ribosomal subunit protein uL13	polymer	203	23533.3	1	UniProt (G1TVS8) Pfam (PF00572)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L13a
21	U (P)	Large ribosomal subunit protein uL22	polymer	183	21345.1	1	UniProt (G1SCJ6) Pfam (PF00237)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L17
22	V (Q)	Large ribosomal subunit protein eL18	polymer	187	21568.5	1	UniProt (G1TFE0) Pfam (PF17135)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L18
23	W (R)	Large ribosomal subunit protein eL19	polymer	196	23516.2	1	UniProt (G1TYL6) Pfam (PF01280) Pfam (PF25476)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L19
24	X (S)	Large ribosomal subunit protein eL20	polymer	176	20749.4	1	UniProt (G1TTY7) Pfam (PF01775)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L18a
25	Y (T)	eL21	polymer	160	18610.0	1	UniProt (G1SHQ2) Pfam (PF01157)	Oryctolagus cuniculus (rabbit)
26	Z (U)	Large ribosomal subunit protein eL22	polymer	128	14996.2	1	UniProt (G1TSG1) Pfam (PF01776)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L22
27	AA (V)	Ribosomal protein L23	polymer	140	14892.5	1	UniProt (G1T6D1) Pfam (PF00238)	Oryctolagus cuniculus (rabbit)
28	BA (W)	eL24	polymer	157	17825.1	1	UniProt (G1SE28) Pfam (PF01246)	Oryctolagus cuniculus (rabbit)
29	CA (X)	eL23	polymer	156	17768.2	1	UniProt (G1SE76) Pfam (PF03939) Pfam (PF00276)	Oryctolagus cuniculus (rabbit)
30	DA (Y)	uL24	polymer	145	17303.4	1	UniProt (G1SQH0) Pfam (PF16906) Pfam (PF00467)	Oryctolagus cuniculus (rabbit)
31	EA (Z)	60S ribosomal protein L27	polymer	136	15835.8	1	UniProt (G1TXF6) Pfam (PF00467) Pfam (PF01777)	Oryctolagus cuniculus (rabbit)
32	FA (a)	60S ribosomal protein L27a	polymer	148	16620.6	1	UniProt (G1SNY0) Pfam (PF00828)	Oryctolagus cuniculus (rabbit)
33	GA (c)	eL30	polymer	115	12807.1	1	UniProt (G1TDL2) Pfam (PF01248)	Oryctolagus cuniculus (rabbit)
34	HA (d)	eL31	polymer	125	14494.9	1	UniProt (G1SHG0) Pfam (PF01198)	Oryctolagus cuniculus (rabbit)
35	IA (e)	Large ribosomal subunit protein eL32	polymer	135	15959.1	1	UniProt (G1TUN8) Pfam (PF01655)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L32
36	JA (f)	eL33	polymer	110	12580.8	1	UniProt (G1SF08) Pfam (PF01247)	Oryctolagus cuniculus (rabbit)
37	KA (g)	60S ribosomal protein L34	polymer	117	13326.1	1	UniProt (G1TXG5) Pfam (PF01199)	Oryctolagus cuniculus (rabbit)
38	LA (h)	eL35	polymer	123	14566.6	1	UniProt (G1SIT5) Pfam (PF00831)	Oryctolagus cuniculus (rabbit)
39	MA (i)	Large ribosomal subunit protein eL36	polymer	105	12364.0	1	UniProt (G1TTQ5) Pfam (PF01158)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L36
40	NA (j)	Ribosomal protein L37	polymer	97	11111.0	1	UniProt (U3KPD5) Pfam (PF01907)	Oryctolagus cuniculus (rabbit)
41	OA (k)	Large ribosomal subunit protein eL38	polymer	70	8223.9	1	UniProt (G1U001) Pfam (PF01781)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L38
42	PA (l)	eL39	polymer	51	6455.8	1	UniProt (G1TTN1) Pfam (PF00832)	Oryctolagus cuniculus (rabbit)
43	QA (n)	eL41	polymer	25	3473.5	1	UniProt (A0A087WNH4) Pfam (PF05162)	Oryctolagus cuniculus (rabbit)	60s ribosomal protein l41
44	RA (o)	Large ribosomal subunit protein eL42	polymer	111	13096.8	1	UniProt (G1T040) Pfam (PF00935)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L36a
45	SA (p)	eL43	polymer	92	10299.4	1	UniProt (G1SY53) Pfam (PF01780)	Oryctolagus cuniculus (rabbit)
46	TA (q)	uS2 (SA)	polymer	295	32928.0	1	UniProt (G1TLT8) Pfam (PF00318) Pfam (PF16122)	Oryctolagus cuniculus (rabbit)	40S ribosomal protein SA, 37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40
47	UA (r)	eL28	polymer	137	15783.6	1	UniProt (G1U7L1) Pfam (PF01778)	Oryctolagus cuniculus (rabbit)
48	VA (u)	40S ribosomal protein S3a	polymer	264	30002.1	1	UniProt (G1SS70) Pfam (PF01015)	Oryctolagus cuniculus (rabbit)
49	WA (v)	Small ribosomal subunit protein uS5	polymer	293	31328.5	1	UniProt (G1SWM1) Pfam (PF03719) Pfam (PF00333)	Oryctolagus cuniculus (rabbit)	40S ribosomal protein S2
50	XA (w)	Ribosomal protein S3	polymer	243	26715.3	1	UniProt (G1TNM3) Pfam (PF07650) Pfam (PF00189)	Oryctolagus cuniculus (rabbit)
51	YA (x)	40S ribosomal protein S4	polymer	263	29658.9	1	UniProt (G1TK17) Pfam (PF08071) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121)	Oryctolagus cuniculus (rabbit)
52	ZA (z)	40S ribosomal protein S6	polymer	249	28751.9	1	UniProt (G1TM55) Pfam (PF01092)	Oryctolagus cuniculus (rabbit)
53	AB (2)	tRNA	polymer	76	24414.5	1		Oryctolagus cuniculus (rabbit)
54	BB (5)	28S rRNA	polymer	7224	2334342.8	1		Oryctolagus cuniculus (rabbit)
55	CB (8)	5.8S rRNA	polymer	156	50143.6	1	GenBank (2795784436)	Oryctolagus cuniculus (rabbit)
56	DB (E)	60S ribosomal protein L6	polymer	291	33028.3	1	UniProt (G1SKF7) Pfam (PF03868) Pfam (PF01159)	Oryctolagus cuniculus (rabbit)
57	EB (b)	Large ribosomal subunit protein eL29	polymer	245	26708.7	1	UniProt (G1SGR6) Pfam (PF01779)	Oryctolagus cuniculus (rabbit)	60S ribosomal protein L29
58	FB (y)	Ribosomal protein S5	polymer	204	22913.5	1	UniProt (G1TFM5) Pfam (PF00177)	Oryctolagus cuniculus (rabbit)
59	GB (BB)	40S ribosomal protein S7	polymer	194	22168.9	1	UniProt (G1SVB0) Pfam (PF01251)	Oryctolagus cuniculus (rabbit)
60	HB (CC)	40S ribosomal protein S8	polymer	208	24263.4	1	UniProt (G1TJW1) Pfam (PF01201)	Oryctolagus cuniculus (rabbit)
61	IB (DD)	Ribosomal protein S9 (Predicted)	polymer	194	22641.6	1	UniProt (B7NZS8) Pfam (PF00163) Pfam (PF01479)	Oryctolagus cuniculus (rabbit)
62	JB (SS)	S10_plectin domain-containing protein	polymer	165	18933.8	1	UniProt (G1TPV3) Pfam (PF03501)	Oryctolagus cuniculus (rabbit)
63	KB (EE)	Ribosomal protein S11	polymer	158	18468.8	1	UniProt (G1TRM4) Pfam (PF16205) Pfam (PF00366)	Oryctolagus cuniculus (rabbit)
64	LB (RR)	40S ribosomal protein S12	polymer	132	14539.0	1	UniProt (G1SFR8) Pfam (PF01248)	Oryctolagus cuniculus (rabbit)
65	MB (QQ)	Ribosomal protein S13	polymer	151	17259.4	1	UniProt (G1SP51) Pfam (PF08069) Pfam (PF00312)	Oryctolagus cuniculus (rabbit)
66	NB (MM)	Small ribosomal subunit protein uS11	polymer	151	16302.8	1	UniProt (G1T1F0) Pfam (PF00411)	Oryctolagus cuniculus (rabbit)	40S ribosomal protein S14
67	OB (WW)	uS19	polymer	145	17049.2	1	UniProt (G1U0Q2) Pfam (PF00203)	Oryctolagus cuniculus (rabbit)
68	PB (UU)	uS9	polymer	146	16477.4	1	UniProt (G1SGX4) Pfam (PF00380)	Oryctolagus cuniculus (rabbit)
69	QB (KK)	eS17	polymer	135	15552.1	1	UniProt (G1TU13) Pfam (PF00833)	Oryctolagus cuniculus (rabbit)
70	RB (II)	uS13	polymer	152	17759.8	1	UniProt (G1TPG3) Pfam (PF00416)	Oryctolagus cuniculus (rabbit)
71	SB (PP)	eS19	polymer	145	16235.8	1	UniProt (G1TN62) Pfam (PF01090)	Oryctolagus cuniculus (rabbit)
72	TB (GG)	uS10	polymer	119	13398.8	1	UniProt (G1SIZ2) Pfam (PF00338)	Oryctolagus cuniculus (rabbit)
73	UB (HH)	Small ribosomal subunit protein eS21	polymer	83	9139.3	1	UniProt (G1TM82) Pfam (PF01249)	Oryctolagus cuniculus (rabbit)	40S ribosomal protein S21
74	VB (TT)	Ribosomal protein S15a	polymer	130	14865.6	1	UniProt (G1TG89) Pfam (PF00410)	Oryctolagus cuniculus (rabbit)
75	WB (VV)	uS12	polymer	143	15844.7	1	UniProt (G1SZ47) Pfam (PF00164)	Oryctolagus cuniculus (rabbit)	40S ribosomal protein S23
76	XB (NN)	Small ribosomal subunit protein eS24	polymer	133	15463.3	1	UniProt (A0A5F9D2E6) Pfam (PF01282)	Oryctolagus cuniculus (rabbit)	40S ribosomal protein S24
77	YB (OO)	eS25	polymer	124	13645.0	1	UniProt (G1TDB3) Pfam (PF03297)	Oryctolagus cuniculus (rabbit)	40S ribosomal protein S25
78	ZB (LL)	eS26	polymer	115	13015.5	1	UniProt (G1TFE8) Pfam (PF01283)	Oryctolagus cuniculus (rabbit)	40S ribosomal protein S26
79	AC (JJ)	40S ribosomal protein S27	polymer	84	9480.2	1	UniProt (G1TZ76) Pfam (PF01667)	Oryctolagus cuniculus (rabbit)
80	BC (FF)	Ribosomal protein S28	polymer	69	7855.1	1	UniProt (G1TIB4) Pfam (PF01200)	Oryctolagus cuniculus (rabbit)
81	CC (AA)	40S ribosomal protein S30	polymer	133	14498.9	1	UniProt (G1T8A2) Pfam (PF00240) Pfam (PF04758)	Oryctolagus cuniculus (rabbit)
82	DC (EF)	Transcription factor BTF3	polymer	162	17724.0	1	UniProt (P20290) Pfam (PF01849)	Homo sapiens (human)	Nascent polypeptide-associated complex subunit beta,NAC-beta,RNA polymerase B transcription factor 3
83	EC (EG)	Nascent polypeptide-associated complex subunit alpha	polymer	215	23406.8	1	UniProt (Q13765) Pfam (PF01849) Pfam (PF19026)	Homo sapiens (human)	NAC-alpha,Alpha-NAC
84	FC (EH)	Nascent Chain	polymer	33	3637.4	1		Oryctolagus cuniculus (rabbit)
85	GC, KN, SF, UF, XF... (m, LL, g, j, o...)	ZINC ION	non-polymer		65.4	6	Chemie (ZN)
86	AD, AE, AF, AG, AH... (K, 5, 8, 7, PP...)	MAGNESIUM ION	non-polymer		24.3	285	Chemie (MG)

Sequence modifications

7: 1 - 120 (GenBank: X06789.1)

PDB	External Database	Details
U 2	N 2	conflict
C 36	N 36	conflict
U 102	N 102	conflict
U 112	N 112	conflict
U 114	N 114	conflict
U 119	C 119	conflict
U 120	N 120	conflict

P: 1 - 183 (UniProt: G1SCJ6)

PDB	External Database	Details
-	Val 157	deletion

Q: 2 - 188 (UniProt: G1TFE0)

PDB	External Database	Details
Asp 4	Asn 4	conflict
Arg 14	Trp 14	conflict
Met 53	Leu 53	conflict
Arg 58	Trp 58	conflict
Arg 75	Gln 75	conflict
Ala 80	Pro 80	conflict
Val 86	Ile 86	conflict
Arg 104	His 104	conflict
Arg 110	Cys 110	conflict
Val 137	Gly 137	conflict
Gly 157	Arg 157	conflict
Arg 181	Trp 181	conflict

R: 1 - 196 (UniProt: G1TYL6)

PDB	External Database	Details
Arg 38	His 38	conflict

U: 1 - 128 (UniProt: G1TSG1)

PDB	External Database	Details
Phe 39	Ser 39	conflict

e: 1 - 135 (UniProt: G1TUN8)

PDB	External Database	Details
Arg 108	Cys 108	conflict

v: 1 - 293 (UniProt: G1SWM1)

PDB	External Database	Details
Phe 97	Cys 97	conflict
Val 191	-	insertion

CC: 1 - 208 (UniProt: G1TJW1)

PDB	External Database	Details
Arg 47	Gly 47	conflict

LL: 1 - 115 (UniProt: G1TFE8)

PDB	External Database	Details
Arg 28	Cys 28	conflict

Sequence viewer

Contents of the asymmetric unit

Polymers	Number of chains	84
Polymers	Total formula weight	5446693.6
Non-Polymers*	Number of molecules	291
Non-Polymers*	Total formula weight	7319.4
All*	Total formula weight	5454013.0

*Water molecules are not included.

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)