9MPT

Cryo-EM structure of VCPIP1 UBX domain bound to VCP N-domain (with D1 domain)

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (B)	Deubiquitinating protein VCPIP1	polymer	1250	137335.4	1	UniProt (Q96JH7) Pfam (PF19437) Pfam (PF02338) Pfam (PF21403)	Homo sapiens (human)	Valosin-containing protein p97/p47 complex-interacting protein 1,Valosin-containing protein p97/p47 complex-interacting protein p135,VCP/p47 complex-interacting 135-kDa protein
2	B (A)	Transitional endoplasmic reticulum ATPase	polymer	832	92022.5	1	UniProt (P55072) Pfam (PF02359) Pfam (PF02933) Pfam (PF00004) Pfam (PF17862)	Homo sapiens (human)	TER ATPase,15S Mg(2+)-ATPase p97 subunit,Valosin-containing protein,VCP

Sequence modifications

B: 1 - 1222 (UniProt: Q96JH7)

PDB	External Database	Details
Met -27	-	expression tag
Gly -26	-	expression tag
Asp -25	-	expression tag
Trp -24	-	expression tag
Ser -23	-	expression tag
His -22	-	expression tag
Pro -21	-	expression tag
Gln -20	-	expression tag
Phe -19	-	expression tag
Glu -18	-	expression tag
Lys -17	-	expression tag
Ser -16	-	expression tag
Gly -15	-	expression tag
Gly -14	-	expression tag
Gly -13	-	expression tag
Ser -12	-	expression tag
Gly -11	-	expression tag
Gly -10	-	expression tag
Leu -9	-	expression tag
Glu -8	-	expression tag
Val -7	-	expression tag
Leu -6	-	expression tag
Phe -5	-	expression tag
Gln -4	-	expression tag
Gly -3	-	expression tag
Pro -2	-	expression tag
Gly -1	-	expression tag
Ser 0	-	expression tag

A: 1 - 806 (UniProt: P55072)

PDB	External Database	Details
Met -25	-	expression tag
Gly -24	-	expression tag
Asp -23	-	expression tag
Tyr -22	-	expression tag
Lys -21	-	expression tag
Asp -20	-	expression tag
Asp -19	-	expression tag
Asp -18	-	expression tag
Asp -17	-	expression tag
Lys -16	-	expression tag
Gly -15	-	expression tag
Gly -14	-	expression tag
Gly -13	-	expression tag
Ser -12	-	expression tag
Gly -11	-	expression tag
Gly -10	-	expression tag
Leu -9	-	expression tag
Glu -8	-	expression tag
Val -7	-	expression tag
Leu -6	-	expression tag
Phe -5	-	expression tag
Gln -4	-	expression tag
Gly -3	-	expression tag
Pro -2	-	expression tag
Gly -1	-	expression tag
Ser 0	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	229358.0
All*	Total formula weight	229358.0

*Water molecules are not included.