9MNN
Crystal structure of L. monocytogenes MenD with Mg2+ and intermediate I bound
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase | polymer | 583 | 64929.5 | 1 | UniProt (A0A0H3GD77) | Listeria monocytogenes 10403S | SEPHCHC synthase,Menaquinone biosynthesis protein MenD |
| 2 | B (A) | (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid | non-polymer | 527.4 | 1 | Chemie (TD6) | |||
| 3 | C, D (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 4 | E (A) | water | water | 18.0 | 27 | Chemie (HOH) |
Sequence modifications
A: 1 - 580 (UniProt: A0A0H3GD77)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Ala -1 | - | expression tag |
| Met 0 | - | expression tag |
| Val 1 | Met 1 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 64929.5 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 576.0 | |
| All* | Total formula weight | 65505.5 |
