9ML9
Crystal structure of the SARS-CoV-2 RBD in complex with the rabbit M8b-C9 Fab
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Spike protein S1 | polymer | 212 | 24004.9 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2 2019-nCoV COVID-19 virus) | |
| 2 | B (H) | M8b-C9 heavy chain | polymer | 236 | 25015.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 3 | C (L) | M8b-C9 light chain | polymer | 217 | 23560.2 | 1 | Oryctolagus cuniculus (rabbit) | ||
| 4 | D (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 5 | E, F (A) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 2 | Chemie (TRS) | |||
| 6 | G, H, I (A, H, L) | water | water | 18.0 | 23 | Chemie (HOH) |
Sequence modifications
A: 328 - 533 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| His 534 | - | expression tag |
| His 535 | - | expression tag |
| His 536 | - | expression tag |
| His 537 | - | expression tag |
| His 538 | - | expression tag |
| His 539 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 72580.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 465.5 | |
| All* | Total formula weight | 73045.8 |
