9MKK
Structure of arbekacin bound Escherichia coli 70S ribosome
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | 50S ribosomal protein L33 | polymer | 55 | 6388.6 | 1 | UniProt (C3SME7) Pfam (PF00471) | Escherichia coli | |
| 2 | B (1) | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 1 | UniProt (B7MGC4) Pfam (PF00468) | Escherichia coli | |
| 3 | C (2) | 50S ribosomal protein L35 | polymer | 65 | 7313.0 | 1 | UniProt (P0A7Q1) Pfam (PF01632) | Escherichia coli | Large ribosomal subunit protein bL35,Ribosomal protein A |
| 4 | D (3) | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (A0A0E2L017) Pfam (PF00444) | Escherichia coli | |
| 5 | E (4) | 50S ribosomal protein L31 | polymer | 70 | 7887.1 | 1 | UniProt (P0A7M9) Pfam (PF01197) | Escherichia coli | Large ribosomal subunit protein bL31-A |
| 6 | F (B) | 30S ribosomal protein S2 | polymer | 241 | 26781.7 | 1 | UniProt (C3TPN2) Pfam (PF00318) | Escherichia coli | |
| 7 | G (C) | Small ribosomal subunit protein uS3 | polymer | 233 | 26031.3 | 1 | UniProt (B7MCS9) Pfam (PF07650) Pfam (PF00189) | Escherichia coli | |
| 8 | H (D) | Small ribosomal subunit protein uS4 | polymer | 206 | 23514.2 | 1 | UniProt (P0A7V8) Pfam (PF01479) Pfam (PF00163) | Escherichia coli | |
| 9 | I (E) | Small ribosomal subunit protein uS5 | polymer | 167 | 17629.4 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) | Escherichia coli | |
| 10 | J (F) | Small ribosomal subunit protein bS6 | polymer | 135 | 15727.5 | 1 | UniProt (P02358) Pfam (PF01250) | Escherichia coli | |
| 11 | K (G) | Small ribosomal subunit protein uS7 | polymer | 179 | 20055.2 | 1 | UniProt (P02359) Pfam (PF00177) | Escherichia coli | |
| 12 | L (H) | Small ribosomal subunit protein uS8 | polymer | 130 | 14146.6 | 1 | UniProt (C3SR12) Pfam (PF00410) | Escherichia coli | |
| 13 | M (I) | Small ribosomal subunit protein uS9 | polymer | 130 | 14886.3 | 1 | UniProt (C3SRY2) Pfam (PF00380) | Escherichia coli | |
| 14 | N (J) | Small ribosomal subunit protein uS10 | polymer | 103 | 11755.6 | 1 | UniProt (C3SQT7) Pfam (PF00338) | Escherichia coli | |
| 15 | O (K) | 30S ribosomal protein S11 | polymer | 129 | 13871.0 | 1 | UniProt (B7MCR3) Pfam (PF00411) | Escherichia coli | |
| 16 | P (L) | 30S ribosomal protein S12 | polymer | 124 | 13768.2 | 1 | UniProt (P0A7S3) Pfam (PF00164) | Escherichia coli | |
| 17 | Q (M) | Small ribosomal subunit protein uS13 | polymer | 118 | 13128.5 | 1 | UniProt (A0A7U9IV78) Pfam (PF00416) | Escherichia coli | |
| 18 | R (N) | Small ribosomal subunit protein uS14 | polymer | 101 | 11606.6 | 1 | UniProt (A0A2X1PQW4) Pfam (PF00253) | Escherichia coli | |
| 19 | S (O) | Small ribosomal subunit protein uS15 | polymer | 89 | 10290.8 | 1 | UniProt (C3SSQ7) Pfam (PF00312) | Escherichia coli | |
| 20 | T (P) | Small ribosomal subunit protein bS16 | polymer | 82 | 9207.6 | 1 | UniProt (C3SYP2) Pfam (PF00886) | Escherichia coli | |
| 21 | U (Q) | Small ribosomal subunit protein uS17 | polymer | 84 | 9724.5 | 1 | UniProt (C3SQY7) Pfam (PF00366) | Escherichia coli | |
| 22 | V (R) | Small ribosomal subunit protein bS18 | polymer | 75 | 9005.5 | 1 | UniProt (A0A0E2KXL3) Pfam (PF01084) | Escherichia coli | |
| 23 | W (S) | Small ribosomal subunit protein uS19 | polymer | 92 | 10455.4 | 1 | UniProt (C3SQW2) Pfam (PF00203) | Escherichia coli | |
| 24 | X (T) | Small ribosomal subunit protein bS20 | polymer | 87 | 9708.5 | 1 | UniProt (C3TRH7) Pfam (PF01649) | Escherichia coli | |
| 25 | Y (U) | Small ribosomal subunit protein bS21 | polymer | 71 | 8524.0 | 1 | UniProt (A0A0E2L2J1) Pfam (PF01165) | Escherichia coli | |
| 26 | Z (X) | mRNA | polymer | 28 | 9099.5 | 1 | Escherichia coli | ||
| 27 | AA (Z) | tRNA-fMet | polymer | 76 | 24497.6 | 1 | GenBank (1848949880) | Escherichia coli | |
| 28 | BA (b) | 5S rRNA | polymer | 120 | 38790.1 | 1 | GenBank (1273279017) | Escherichia coli | |
| 29 | CA (c) | 50S ribosomal protein L2 | polymer | 273 | 29923.6 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) | Escherichia coli | Large ribosomal subunit protein uL2 |
| 30 | DA (d) | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) Pfam (PF00297) | Escherichia coli | Large ribosomal subunit protein uL3 |
| 31 | EA (e) | Large ribosomal subunit protein uL4 | polymer | 201 | 22121.6 | 1 | UniProt (P60723) Pfam (PF00573) | Escherichia coli | 50S ribosomal protein L4 |
| 32 | FA (f) | Large ribosomal subunit protein uL5 | polymer | 179 | 20333.6 | 1 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) | Escherichia coli | 50S ribosomal protein L5 |
| 33 | GA (g) | Large ribosomal subunit protein uL6 | polymer | 177 | 18932.8 | 1 | UniProt (P0AG55) Pfam (PF00347) | Escherichia coli | 50S ribosomal protein L6 |
| 34 | HA (i) | Large ribosomal subunit protein uL13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) Pfam (PF00572) | Escherichia coli | 50S ribosomal protein L13 |
| 35 | IA (j) | Large ribosomal subunit protein uL14 | polymer | 123 | 13565.1 | 1 | UniProt (P0ADY3) Pfam (PF00238) | Escherichia coli | 50S ribosomal protein L14 |
| 36 | JA (k) | Large ribosomal subunit protein uL15 | polymer | 144 | 15008.5 | 1 | UniProt (P02413) Pfam (PF00828) | Escherichia coli | 50S ribosomal protein L15 |
| 37 | KA (l) | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 1 | UniProt (P0ADY7) Pfam (PF00252) | Escherichia coli | Large ribosomal subunit protein uL16 |
| 38 | LA (m) | Large ribosomal subunit protein bL17 | polymer | 127 | 14393.7 | 1 | UniProt (P0AG44) Pfam (PF01196) | Escherichia coli | 50S ribosomal protein L17 |
| 39 | MA (n) | Large ribosomal subunit protein uL18 | polymer | 117 | 12794.7 | 1 | UniProt (P0C018) Pfam (PF00861) | Escherichia coli | 50S ribosomal protein L18 |
| 40 | NA (o) | Large ribosomal subunit protein bL19 | polymer | 115 | 13159.3 | 1 | UniProt (P0A7K8) Pfam (PF01245) | Escherichia coli | |
| 41 | OA (p) | 50S ribosomal protein L20 | polymer | 118 | 13528.0 | 1 | UniProt (B7MAS6) Pfam (PF00453) | Escherichia coli | |
| 42 | PA (q) | Large ribosomal subunit protein bL21 | polymer | 103 | 11586.4 | 1 | UniProt (Q1R6F0) Pfam (PF00829) | Escherichia coli | 50S ribosomal protein L21 |
| 43 | QA (s) | 50S ribosomal protein L23 | polymer | 100 | 11222.2 | 1 | UniProt (C3SQV2) Pfam (PF00276) | Escherichia coli | |
| 44 | RA (t) | 50S ribosomal protein L24 | polymer | 104 | 11339.3 | 1 | UniProt (C3SQZ7) Pfam (PF00467) Pfam (PF17136) | Escherichia coli | |
| 45 | SA (u) | Large ribosomal subunit protein bL25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) | Escherichia coli | |
| 46 | TA (v) | Large ribosomal subunit protein bL27 | polymer | 85 | 9146.5 | 1 | UniProt (P0A7M0) Pfam (PF01016) | Escherichia coli | |
| 47 | UA (w) | 50S ribosomal protein L28 | polymer | 78 | 9027.6 | 1 | UniProt (A0A1X3JA73) Pfam (PF00830) | Escherichia coli | |
| 48 | VA (x) | Large ribosomal subunit protein uL29 | polymer | 63 | 7286.5 | 1 | UniProt (C3SQY2) Pfam (PF00831) | Escherichia coli | |
| 49 | WA (y) | 50S ribosomal protein L30 | polymer | 59 | 6554.8 | 1 | UniProt (C3SR32) Pfam (PF00327) | Escherichia coli | |
| 50 | XA (z) | 50S ribosomal protein L32 | polymer | 57 | 6463.4 | 1 | UniProt (C3TE02) Pfam (PF01783) | Escherichia coli | |
| 51 | YA (A) | 16S rRNA | polymer | 1542 | 499690.0 | 1 | GenBank (1732209707) | Escherichia coli | |
| 52 | ZA (a) | 23S rRNA | polymer | 2904 | 941612.4 | 1 | GenBank (687670942) | Escherichia coli | |
| 53 | AB, BB (A, a) | Arbekacin | non-polymer | 552.6 | 2 | Chemie (84G) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 52 |
| Total formula weight | 2145612.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 1105.2 | |
| All* | Total formula weight | 2146717.7 |
