9MJ1
Native tagless Lassa virus spike complex bound at pH 8.0
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E, F (a, b, c) | Glycoprotein G2 | polymer | 232 | 26828.1 | 3 | UniProt (P08669) | Lassa virus Josiah | GP2 |
| 2 | B, C, D (A, B, C) | Glycoprotein G1 | polymer | 259 | 29064.4 | 3 | UniProt (P08669) | Lassa virus Josiah | |
| 3 | G, K, L (H, D, F) | 12.1F Heavy chain | polymer | 249 | 26793.7 | 3 | Homo sapiens | ||
| 4 | H, I, J (L, E, G) | 12.1F Light chain | polymer | 214 | 23492.1 | 3 | Homo sapiens | ||
| 5 | M (I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1276.2 | 1 | In PDB GlyTouCan (G53168IY) | |||
| 6 | N, P, U, Z (J, M, R, W) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 4 | In PDB GlyTouCan (G15407YE) | |||
| 7 | O, T, Y (K, Q, V) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 3 | In PDB GlyTouCan (G00395TQ) | |||
| 8 | AA, Q, V (X, N, S) | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1276.2 | 3 | In PDB GlyTouCan (G69411IG) | |||
| 9 | R (O) | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 1 | In PDB | |||
| 10 | S, X (P, U) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 2 | In PDB GlyTouCan (G81315DD) | |||
| 11 | BA, W (Y, T) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 2 | In PDB GlyTouCan (G42466VF) | |||
| 12 | CA (Z) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
| 13 | DA (d) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1114.0 | 1 | In PDB GlyTouCan (G61751GZ) | |||
| 14 | EA, FA, GA (e, f, g) | alpha-D-xylopyranose-(1-3)-beta-D-glucopyranuronic acid-(1-3)-alpha-D-xylopyranose | branched | 458.4 | 3 | In PDB GlyTouCan (G54924MX) | |||
| 15 | HA, IA, LA, MA, NA... (a, A, B, C, b...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 12 | Chemie (NAG) | |||
| 16 | JA, KA (a) | UNKNOWN LIGAND | non-polymer | 54.9 | 2 | Chemie (UNX) | |||
| 17 | AB, BB, CB, DB, EB... (c, H, L, E, G...) | water | water | 18.0 | 3111 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 318534.8 | |
| Branched | Number of molecules | 21 |
| Total formula weight | 17879.2 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 2764.4 | |
| All* | Total formula weight | 339178.4 |
