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9MBL

2-Oxo-dATP hydrolysis in human MTH1(G2K mutant) crystal using Mn2+: the ES-2M complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
7,8-dihydro-8-oxoguanine triphosphatasepolymer15618043.62UniProt (P36639)
Pfam (PF00293)
Homo sapiens (human)MutT homologue-1,2-hydroxy-dATP diphosphatase,8-oxo-dGTPase,Nucleoside diphosphate-linked moiety X motif 1,Nudix motif 1
2C, H
(A, B)
[[(2R,3S,5R)-5-(6-azanyl-2-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphatenon-polymer507.22Chemie (6U4)
3D, E, I, J
(A, B)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
4F, G, K, L
(A, B)
SODIUM IONnon-polymer23.04Chemie (NA)
5M, N
(A, B)
waterwater18.0409Chemie (HOH)
Sequence modifications
A, B: 1 - 156 (UniProt: P36639)
PDBExternal DatabaseDetails
Lys 2Gly 43engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight36087.2
Non-Polymers*Number of molecules10
Total formula weight1326.1
All*Total formula weight37413.3
*Water molecules are not included.

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PDB entries from 2025-08-06

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