9LWJ
The head-arm region of HBx-Smc5/6 ubiquitination complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Structural maintenance of chromosomes protein 6 | polymer | 1091 | 126530.9 | 1 | UniProt (Q96SB8) Pfam (PF02463) | Homo sapiens (human) | SMC protein 6,SMC-6,hSMC6 |
| 2 | B (B) | DNA damage-binding protein 1 | polymer | 1140 | 127097.5 | 1 | UniProt (Q16531) Pfam (PF10433) Pfam (PF23726) Pfam (PF03178) | Homo sapiens (human) | DDB p127 subunit,DNA damage-binding protein a,DDBa,Damage-specific DNA-binding protein 1,HBV X-associated protein 1,XAP-1,UV-damaged DNA-binding factor,UV-damaged DNA-binding protein 1,UV-DDB 1,XPE-binding factor,XPE-BF,Xeroderma pigmentosum group E-complementing protein,XPCe |
| 3 | C (C) | Protein X | polymer | 154 | 16587.3 | 1 | UniProt (Q2F514) | Hepatitis B virus | HBx,Peptide X,pX |
| 4 | D (D) | EP300-interacting inhibitor of differentiation 3 | polymer | 333 | 38213.3 | 1 | UniProt (Q8N140) Pfam (PF15412) Pfam (PF08743) | Homo sapiens (human) | EID-3,E1A-like inhibitor of differentiation 3,EID-1-like inhibitor of differentiation 3,Non-structural maintenance of chromosomes element 4 homolog B,NS4EB,Non-SMC element 4 homolog B |
| 5 | E (E) | Non-structural maintenance of chromosomes element 3 homolog | polymer | 304 | 34361.0 | 1 | UniProt (Q96MG7) Pfam (PF01454) | Homo sapiens (human) | Non-SMC element 3 homolog,Hepatocellular carcinoma-associated protein 4,MAGE-G1 antigen,Melanoma-associated antigen G1,Necdin-like protein 2 |
| 6 | F (F) | Non-structural maintenance of chromosomes element 1 homolog | polymer | 266 | 30903.5 | 1 | UniProt (Q8WV22) Pfam (PF07574) Pfam (PF08746) | Homo sapiens (human) | Non-SMC element 1 homolog |
| 7 | G (G) | Cullin-4A | polymer | 760 | 87871.4 | 1 | UniProt (Q13619) Pfam (PF00888) Pfam (PF26557) Pfam (PF10557) | Homo sapiens (human) | CUL-4A |
| 8 | H (H) | E3 ubiquitin-protein ligase RBX1 | polymer | 108 | 12290.0 | 1 | UniProt (P62877) Pfam (PF12678) | Homo sapiens (human) | E3 ubiquitin-protein transferase RBX1,Protein ZYP,RING finger protein 75,RING-box protein 1,Rbx1,Regulator of cullins 1,ROC1 |
| 9 | I (I) | Structural maintenance of chromosomes protein 5 | polymer | 1101 | 129014.6 | 1 | UniProt (Q8IY18) Pfam (PF13476) | Homo sapiens (human) | SMC protein 5,SMC-5,hSMC5 |
| 10 | J (J) | E3 SUMO-protein ligase NSE2 | polymer | 247 | 27977.6 | 1 | UniProt (Q96MF7) Pfam (PF11789) | Homo sapiens (human) | E3 SUMO-protein transferase NSE2,MMS21 homolog,hMMS21,Non-structural maintenance of chromosomes element 2 homolog,Non-SMC element 2 homolog |
| 11 | K, L, M, N, O... (C, F, H) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) PubChem (32051) |
Sequence modifications
G: 1 - 759 (UniProt: Q13619)
| PDB | External Database | Details |
|---|---|---|
| Gly 760 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 630846.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 392.5 | |
| All* | Total formula weight | 631239.4 |
