9LOD
Local structure of human FcRL5 bound to IgG-Fc
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Fc receptor-like protein 5 | polymer | 860 | 94512.0 | 1 | UniProt (Q96RD9) | Homo sapiens (human) | FcR-like protein 5,FcRL5,BXMAS1,Fc receptor homolog 5,FcRH5,Immune receptor translocation-associated protein 2 |
| 2 | B, C, D, E (B, C, D, E) | Immunoglobulin gamma-1 heavy chain | polymer | 250 | 28081.8 | 4 | UniProt (P0DOX5) | Homo sapiens (human) | Immunoglobulin gamma-1 heavy chain NIE |
| 3 | F (F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1098.0 | 1 | In PDB GlyTouCan (G39203UC) | |||
| 4 | G (G) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 951.9 | 1 | In PDB GlyTouCan (G12045WP) | |||
| 5 | H (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
A: 16 - 851 (UniProt: Q96RD9)
B, C, D, E: 216 - 441 (UniProt: P0DOX5)
| PDB | External Database | Details |
|---|---|---|
| His 852 | - | expression tag |
| His 853 | - | expression tag |
| His 854 | - | expression tag |
| His 855 | - | expression tag |
| His 856 | - | expression tag |
| His 857 | - | expression tag |
| His 858 | - | expression tag |
| His 859 | - | expression tag |
| Trp 860 | - | expression tag |
| Arg 861 | - | expression tag |
| Pro 862 | - | expression tag |
| Leu 863 | - | expression tag |
| Glu 864 | - | expression tag |
| Ser 865 | - | expression tag |
| Arg 866 | - | expression tag |
| Val 867 | - | expression tag |
| Asp 868 | - | expression tag |
| Tyr 869 | - | expression tag |
| Lys 870 | - | expression tag |
| Asp 871 | - | expression tag |
| Asp 872 | - | expression tag |
| Asp 873 | - | expression tag |
| Asp 874 | - | expression tag |
| Lys 875 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Cys 309 | Leu 311 | conflict |
| Asp 442 | - | expression tag |
| Lys 443 | - | expression tag |
| Ser 444 | - | expression tag |
| Thr 445 | - | expression tag |
| Gly 446 | - | expression tag |
| Lys 447 | - | expression tag |
| Pro 448 | - | expression tag |
| Thr 449 | - | expression tag |
| Leu 450 | - | expression tag |
| Tyr 451 | - | expression tag |
| Asn 452 | - | expression tag |
| Val 453 | - | expression tag |
| Ser 454 | - | expression tag |
| Leu 455 | - | expression tag |
| Ile 456 | - | expression tag |
| Met 457 | - | expression tag |
| Ser 458 | - | expression tag |
| Asp 459 | - | expression tag |
| Thr 460 | - | expression tag |
| Gly 461 | - | expression tag |
| Gly 462 | - | expression tag |
| Thr 463 | - | expression tag |
| Cys 464 | - | expression tag |
| Tyr 465 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 206839.1 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 2049.9 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 209110.2 |
