9LM6
Cryo-EM structure of prefusion-stabilized RSV F (DS-Cav1 strain: A2) in complex with nanobody 1D8
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (A, B, C) | Fusion glycoprotein F0 | polymer | 569 | 63260.4 | 3 | UniProt (P03420) | Respiratory syncytial virus A2 | |
| 2 | B, D, F (D, E, F) | nanobody 1D8 | polymer | 139 | 15321.8 | 3 | Camelus bactrianus |
Sequence modifications
A, B, C: 1 - 513 (UniProt: P03420)
| PDB | External Database | Details |
|---|---|---|
| Ala 102 | Pro 102 | variant |
| Cys 155 | Ser 155 | conflict |
| Phe 190 | Ser 190 | conflict |
| Leu 207 | Val 207 | conflict |
| Cys 290 | Ser 290 | conflict |
| Val 379 | Ile 379 | variant |
| Val 447 | Met 447 | variant |
| Ser 514 | - | expression tag |
| Ala 515 | - | expression tag |
| Ile 516 | - | expression tag |
| Gly 517 | - | expression tag |
| Gly 518 | - | expression tag |
| Tyr 519 | - | expression tag |
| Ile 520 | - | expression tag |
| Pro 521 | - | expression tag |
| Glu 522 | - | expression tag |
| Ala 523 | - | expression tag |
| Pro 524 | - | expression tag |
| Arg 525 | - | expression tag |
| Asp 526 | - | expression tag |
| Gly 527 | - | expression tag |
| Gln 528 | - | expression tag |
| Ala 529 | - | expression tag |
| Tyr 530 | - | expression tag |
| Val 531 | - | expression tag |
| Arg 532 | - | expression tag |
| Lys 533 | - | expression tag |
| Asp 534 | - | expression tag |
| Gly 535 | - | expression tag |
| Glu 536 | - | expression tag |
| Trp 537 | - | expression tag |
| Val 538 | - | expression tag |
| Leu 539 | - | expression tag |
| Leu 540 | - | expression tag |
| Ser 541 | - | expression tag |
| Thr 542 | - | expression tag |
| Phe 543 | - | expression tag |
| Leu 544 | - | expression tag |
| Glu 545 | - | expression tag |
| Ala 546 | - | expression tag |
| Ala 547 | - | expression tag |
| Ala 548 | - | expression tag |
| Lys 549 | - | expression tag |
| Glu 550 | - | expression tag |
| Ala 551 | - | expression tag |
| Ala 552 | - | expression tag |
| Ala 553 | - | expression tag |
| Lys 554 | - | expression tag |
| Glu 555 | - | expression tag |
| Ala 556 | - | expression tag |
| Ala 557 | - | expression tag |
| Ala 558 | - | expression tag |
| Lys 559 | - | expression tag |
| His 560 | - | expression tag |
| His 561 | - | expression tag |
| His 562 | - | expression tag |
| His 563 | - | expression tag |
| His 564 | - | expression tag |
| His 565 | - | expression tag |
| His 566 | - | expression tag |
| His 567 | - | expression tag |
| His 568 | - | expression tag |
| His 569 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 235746.7 | |
| All* | Total formula weight | 235746.7 |
