9LEW
The crystal structure of DinJ-YafQ complex from Vibrio cholerae
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, C, E, G) | DNA-damage-inducible protein J | polymer | 94 | 10246.7 | 4 | UniProt (Q9KML3) Pfam (PF04221) | Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) | |
| 2 | B, D, F, H (B, D, F, H) | Type II toxin-antitoxin system YafQ family toxin | polymer | 100 | 11531.5 | 4 | UniProt (Q9KML4) Pfam (PF05016) | Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) | |
| 3 | I (B) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 4 | J, K, L, M, N... (C, D, E, H) | ACETATE ION | non-polymer | 59.0 | 8 | Chemie (ACT) | |||
| 5 | R, S, T, U, V... (A, B, C, D, E...) | water | water | 18.0 | 180 | Chemie (HOH) |
Sequence modifications
A, C, E, G: 1 - 92 (UniProt: Q9KML3)
B, D, F, H: 1 - 98 (UniProt: Q9KML4)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| Gln 94 | His 94 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 87112.8 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 568.4 | |
| All* | Total formula weight | 87681.2 |
