9L99
Structure of Western equine encephalitis virus McMillan strain in complex with VLDLR LA1-2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, G) | Spike glycoprotein E1 | polymer | 411 | 44468.3 | 2 | UniProt (P13897) Pfam (PF01589) | Western equine encephalitis virus (WEEV) | E1 envelope glycoprotein |
| 2 | B, D (B, H) | Spike glycoprotein E2 | polymer | 369 | 41635.3 | 2 | UniProt (P13897) Pfam (PF00943) | Western equine encephalitis virus (WEEV) | E2 envelope glycoprotein |
| 3 | E (N) | Very low-density lipoprotein receptor | polymer | 80 | 8854.7 | 1 | UniProt (P98155) Pfam (PF00057) | Homo sapiens (human) | VLDL receptor,VLDL-R |
| 4 | F, G (N) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) |
Sequence modifications
A, G: 1 - 411 (UniProt: P13897)
B, H: 2 - 370 (UniProt: P13897)
| PDB | External Database | Details |
|---|---|---|
| Lys 50 | Arg 847 | conflict |
| Thr 349 | Val 1146 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Tyr 69 | Phe 388 | conflict |
| Glu 81 | Asp 400 | conflict |
| Gln 146 | His 465 | conflict |
| Arg 157 | His 476 | conflict |
| Lys 181 | Glu 500 | conflict |
| Gln 214 | Arg 533 | conflict |
| Arg 224 | Lys 543 | conflict |
| Leu 231 | Ser 550 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 181061.8 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 80.2 | |
| All* | Total formula weight | 181141.9 |
