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9KUL

Bovine Heart Cytochrome c Oxidase in the Xenon-bound Fully Oxidized State under Anaerobic Condition

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, N
(A, N)
Cytochrome c oxidase subunit 1polymer51457093.92UniProt (P00396)
Pfam (PF00115)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide I
2B, O
(B, O)
Cytochrome c oxidase subunit 2polymer22726068.42UniProt (P68530)
Pfam (PF02790)
Pfam (PF00116)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide II
3C, P
(C, P)
Cytochrome c oxidase subunit 3polymer26129957.62UniProt (P00415)
Pfam (PF00510)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide III
4D, Q
(D, Q)
Cytochrome c oxidase subunit 4 isoform 1, mitochondrialpolymer14717179.62UniProt (P00423)
Pfam (PF02936)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide IV,Cytochrome c oxidase subunit IV isoform 1,COX IV-1
5E, R
(E, R)
Cytochrome c oxidase subunit 5Apolymer10912453.12UniProt (P00426)
Pfam (PF02284)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide Va
6F, S
(F, S)
Cytochrome c oxidase subunit 5B, mitochondrialpolymer9810684.02UniProt (P00428)
Pfam (PF01215)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide VIa,Cytochrome c oxidase polypeptide Vb
7G, T
(G, T)
Cytochrome c oxidase subunit 6A2, mitochondrialpolymer859549.82UniProt (P07471)
Pfam (PF02046)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide VIa-heart,COXVIAH,Cytochrome c oxidase polypeptide VIb
8H, U
(H, U)
Cytochrome c oxidase subunit 6B1polymer8510039.22UniProt (P00429)
Pfam (PF02297)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide VII,Cytochrome c oxidase subunit AED,Cytochrome c oxidase subunit VIb isoform 1,COX VIb-1
9I, V
(I, V)
Cytochrome c oxidase subunit 6Cpolymer738495.02UniProt (P04038)
Pfam (PF02937)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide VIc,Cytochrome c oxidase subunit STA
10J, W
(J, W)
Cytochrome c oxidase subunit 7A1polymer596682.72UniProt (P07470)
Pfam (PF02238)
Bos taurus (domestic cattle)Cytochrome c oxidase subunit VIIIc,VIIIC
11K, X
(K, X)
Cytochrome c oxidase subunit 7B, mitochondrialpolymer566365.22UniProt (P13183)
Pfam (PF05392)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide VIIb,IHQ
12L, Y
(L, Y)
Cytochrome c oxidase subunit 7C, mitochondrialpolymer475449.42UniProt (P00430)
Pfam (PF02935)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide VIIIA
13M, Z
(M, Z)
Cytochrome c oxidase subunit 8B, mitochondrialpolymer464967.82UniProt (P10175)
Pfam (PF02285)
Bos taurus (domestic cattle)Cytochrome c oxidase polypeptide VIII-heart,Cytochrome c oxidase subunit 8-1,Cytochrome c oxidase subunit 8H,IX,VIIIb
14AA, BA, XC, YC
(A, N)
HEME-Anon-polymer852.84Chemie (HEA)
15CA, ZC
(A, N)
COPPER (II) IONnon-polymer63.52Chemie (CU)
16AD, DA
(N, A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
17BD, EA
(N, A)
SODIUM IONnon-polymer23.02Chemie (NA)
18CD, FA
(N, A)
PEROXIDE IONnon-polymer32.02Chemie (PER)
19FE, GA, JB, LF, NF...
(P, A, C, V, Y...)
CARDIOLIPINnon-polymer1464.06Chemie (CDL)
20BE, DD, EB, FC, HA...
(P, N, B, C, A...)
EICOSANEnon-polymer282.526Chemie (LFA)
21AB, AF, BB, CC, DC...
(B, Q, C, N, D...)
DECYL-BETA-D-MALTOPYRANOSIDEnon-polymer482.642Chemie (DMU)
22AC, AE, BC, BF, CB...
(C, O, R, B, S...)
1,2-ETHANEDIOLnon-polymer62.129Chemie (EDO)
23EC, LD, MD, ND, OD...
(C, N, A, O, B...)
XENONnon-polymer131.314Chemie (XE)
24EE, IB, QD, UA
(P, C, N, A)
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEnon-polymer749.04Chemie (PGV)
25WD, YA
(O, B)
DINUCLEAR COPPER IONnon-polymer127.12Chemie (CUA)
26CE, DB, GB, GE, KB...
(P, B, C, G)
CHOLIC ACIDnon-polymer408.66Chemie (CHD)
27DE, HB
(P, C)
UNKNOWN ATOM OR IONnon-polymer2Chemie (UNX)
28EF, KC
(S, F)
ZINC IONnon-polymer65.42Chemie (ZN)
29HF, NC
(T, G)
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATEnon-polymer768.12Chemie (PEK)
30AG, BG, CG, DG, EG...
(J, K, L, M, N...)
waterwater18.02005Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains26
Total formula weight409971.5
Non-Polymers*Number of molecules147
Total formula weight51101.8
All*Total formula weight461073.3
*Water molecules are not included.

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PDB entries from 2025-12-24

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