9KR9
Overall structure of HKU5 S protein with S468A/Y463A mutation
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, C, B) | Spike glycoprotein | polymer | 1352 | 149705.9 | 3 | UniProt (A3EXD0) Pfam (PF16451) Pfam (PF09408) Pfam (PF01601) Pfam (PF19214) | Bat coronavirus HKU5 (BtCoV BtCoV/HKU5/2004) | S glycoprotein,E2,Peplomer protein |
| 2 | AA, BA, CA, D, DA... (a, b, c, D, d...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 24 | In PDB GlyTouCan (G42666HT) | |||
| 3 | G, P, Y (G, P, Y) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 627.6 | 3 | In PDB BIRD (PRD_900017) GlyTouCan (G47362BJ) | |||
| 4 | AB, EA, PA (B, A, C) | PALMITIC ACID | non-polymer | 256.4 | 3 | Chemie (PLM) | |||
| 5 | BB, CB, DB, EB, FA... (B, A, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 30 | Chemie (NAG) |
Sequence modifications
A, C, B: 1 - 1352 (UniProt: A3EXD0)
| PDB | External Database | Details |
|---|---|---|
| Ala 463 | Tyr 463 | engineered mutation |
| Ala 468 | Ser 468 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 449117.8 | |
| Branched | Number of molecules | 27 |
| Total formula weight | 12068.4 | |
| Non-Polymers* | Number of molecules | 33 |
| Total formula weight | 7405.5 | |
| All* | Total formula weight | 468591.7 |
