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9KQ2

Cryo-EM structure of RNF168'-RNF168-UbcH5c complex bound to nucleosome

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Histone H3polymer13515303.92UniProt (A0A310TTQ1)
Pfam (PF00125)
Xenopus laevis (African clawed frog)
2B, F
(B, F)
Histone H4polymer10211263.22UniProt (A0A8J1LTD2)
Pfam (PF15511)
Xenopus laevis (African clawed frog)
3C, G
(C, G)
Histone H2Apolymer12913978.22UniProt (Q6AZJ8)
Pfam (PF00125)
Pfam (PF16211)
Xenopus laevis (African clawed frog)
4D, H
(D, H)
Histone H2Bpolymer12213524.82UniProt (A0A8J0U496)
Pfam (PF00125)
Xenopus laevis (African clawed frog)
5I
(I)
DNA (147-MER)polymer14745138.81Homo sapiens
6J
(J)
DNA (147-MER)polymer14745610.01Homo sapiens
7K
(K)
E3 ubiquitin-protein ligase RNF168polymer10311802.71UniProt (Q8IYW5)
Pfam (PF14447)
Homo sapiens (human)hRNF168,RING finger protein 168,RING-type E3 ubiquitin transferase RNF168
8L, M
(K)
ZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight210691.8
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight210822.6
*Water molecules are not included.

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PDB entries from 2025-11-19

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